Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRTM1Q9HBL6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRTM1Q9HBL6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRTM1Q9HBL6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LRTM1Q9HBL6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LRTM1Q9HBL6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRTM1Q9HBL6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
LRTM1Q9HBL6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.62■□□□□ 0.89
LRTM1Q9HBL6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRTM1Q9HBL6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.62■□□□□ 0.89
LRTM1Q9HBL6 DUX4L19-201ENST00000557448 1267 ntBASIC20.62■□□□□ 0.89
LRTM1Q9HBL6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRTM1Q9HBL6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LRTM1Q9HBL6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
LRTM1Q9HBL6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LRTM1Q9HBL6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRTM1Q9HBL6 Z98882.1-201ENST00000622160 2253 ntBASIC20.62■□□□□ 0.89
LRTM1Q9HBL6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRTM1Q9HBL6 OXCT2P1-201ENST00000447263 1535 ntBASIC20.62■□□□□ 0.89
LRTM1Q9HBL6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRTM1Q9HBL6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LRTM1Q9HBL6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
LRTM1Q9HBL6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
LRTM1Q9HBL6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRTM1Q9HBL6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRTM1Q9HBL6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRTM1Q9HBL6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
LRTM1Q9HBL6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRTM1Q9HBL6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.61■□□□□ 0.89
LRTM1Q9HBL6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
LRTM1Q9HBL6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRTM1Q9HBL6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRTM1Q9HBL6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRTM1Q9HBL6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LRTM1Q9HBL6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRTM1Q9HBL6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRTM1Q9HBL6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRTM1Q9HBL6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LRTM1Q9HBL6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.6■□□□□ 0.89
LRTM1Q9HBL6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRTM1Q9HBL6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRTM1Q9HBL6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRTM1Q9HBL6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.6■□□□□ 0.89
LRTM1Q9HBL6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LRTM1Q9HBL6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 AC104564.3-201ENST00000582367 638 ntBASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 AC136469.2-201ENST00000623944 1028 ntBASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.59■□□□□ 0.89
LRTM1Q9HBL6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRTM1Q9HBL6 AC005229.4-201ENST00000610085 2198 ntBASIC20.58■□□□□ 0.89
LRTM1Q9HBL6 AC011298.3-201ENST00000615796 283 ntBASIC20.58■□□□□ 0.89
LRTM1Q9HBL6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
LRTM1Q9HBL6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
LRTM1Q9HBL6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRTM1Q9HBL6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRTM1Q9HBL6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.57■□□□□ 0.88
LRTM1Q9HBL6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRTM1Q9HBL6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRTM1Q9HBL6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRTM1Q9HBL6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRTM1Q9HBL6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRTM1Q9HBL6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRTM1Q9HBL6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.57■□□□□ 0.88
LRTM1Q9HBL6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRTM1Q9HBL6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LRTM1Q9HBL6 AC131281.2-201ENST00000520478 145 ntBASIC20.57■□□□□ 0.88
LRTM1Q9HBL6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.57■□□□□ 0.88
LRTM1Q9HBL6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRTM1Q9HBL6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRTM1Q9HBL6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRTM1Q9HBL6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.56■□□□□ 0.88
LRTM1Q9HBL6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
LRTM1Q9HBL6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRTM1Q9HBL6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.56■□□□□ 0.88
LRTM1Q9HBL6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
LRTM1Q9HBL6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.56■□□□□ 0.88
LRTM1Q9HBL6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRTM1Q9HBL6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.56■□□□□ 0.88
LRTM1Q9HBL6 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.56■□□□□ 0.88
LRTM1Q9HBL6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRTM1Q9HBL6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRTM1Q9HBL6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRTM1Q9HBL6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms