Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.95■■□□□ 1.1
RETREG1Q9H6L5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RETREG1Q9H6L5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RETREG1Q9H6L5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.95■■□□□ 1.1
RETREG1Q9H6L5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.95■■□□□ 1.1
RETREG1Q9H6L5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.95■■□□□ 1.1
RETREG1Q9H6L5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG1Q9H6L5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG1Q9H6L5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG1Q9H6L5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.94■■□□□ 1.1
RETREG1Q9H6L5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.94■■□□□ 1.1
RETREG1Q9H6L5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.94■■□□□ 1.1
RETREG1Q9H6L5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG1Q9H6L5 MIR935-201ENST00000401179 91 ntBASIC21.94■■□□□ 1.1
RETREG1Q9H6L5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.94■■□□□ 1.1
RETREG1Q9H6L5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG1Q9H6L5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.94■■□□□ 1.1
RETREG1Q9H6L5 AC087623.3-201ENST00000607047 1098 ntBASIC21.94■■□□□ 1.1
RETREG1Q9H6L5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.94■■□□□ 1.1
RETREG1Q9H6L5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.94■■□□□ 1.1
RETREG1Q9H6L5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RETREG1Q9H6L5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RETREG1Q9H6L5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RETREG1Q9H6L5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.93■■□□□ 1.1
RETREG1Q9H6L5 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RETREG1Q9H6L5 AC079140.4-201ENST00000507448 529 ntBASIC21.93■■□□□ 1.1
RETREG1Q9H6L5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RETREG1Q9H6L5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RETREG1Q9H6L5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 DUX4L2-201ENST00000561772 1275 ntBASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 DUX4L6-201ENST00000626483 1275 ntBASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 DUX4L1-201ENST00000627662 1275 ntBASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 DUX4L8-201ENST00000629013 1275 ntBASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 DUX4L3-201ENST00000630187 1275 ntBASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 DUX4L7-201ENST00000630678 1275 ntBASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 DUX4L5-201ENST00000630834 1275 ntBASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.92■■□□□ 1.1
RETREG1Q9H6L5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.91■■□□□ 1.1
RETREG1Q9H6L5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RETREG1Q9H6L5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.91■■□□□ 1.1
RETREG1Q9H6L5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.91■■□□□ 1.1
RETREG1Q9H6L5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RETREG1Q9H6L5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.91■■□□□ 1.1
RETREG1Q9H6L5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RETREG1Q9H6L5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.9■■□□□ 1.1
RETREG1Q9H6L5 KRT87P-202ENST00000534226 1464 ntBASIC21.9■■□□□ 1.1
RETREG1Q9H6L5 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RETREG1Q9H6L5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RETREG1Q9H6L5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
RETREG1Q9H6L5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.9■■□□□ 1.1
RETREG1Q9H6L5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.9■■□□□ 1.1
RETREG1Q9H6L5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RETREG1Q9H6L5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.9■■□□□ 1.1
RETREG1Q9H6L5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RETREG1Q9H6L5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RETREG1Q9H6L5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RETREG1Q9H6L5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RETREG1Q9H6L5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
RETREG1Q9H6L5 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
RETREG1Q9H6L5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.89■■□□□ 1.09
RETREG1Q9H6L5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RETREG1Q9H6L5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RETREG1Q9H6L5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.89■■□□□ 1.09
RETREG1Q9H6L5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RETREG1Q9H6L5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.89■■□□□ 1.09
RETREG1Q9H6L5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.89■■□□□ 1.09
RETREG1Q9H6L5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RETREG1Q9H6L5 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.89■■□□□ 1.09
RETREG1Q9H6L5 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 FAM99A-202ENST00000538190 1989 ntBASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 AC133561.1-201ENST00000568600 2415 ntBASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETREG1Q9H6L5 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms