Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CDC42EP4Q9H3Q1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42EP4Q9H3Q1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42EP4Q9H3Q1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42EP4Q9H3Q1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42EP4Q9H3Q1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.85■■□□□ 1.09
CDC42EP4Q9H3Q1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42EP4Q9H3Q1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42EP4Q9H3Q1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42EP4Q9H3Q1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42EP4Q9H3Q1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.85■■□□□ 1.09
CDC42EP4Q9H3Q1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42EP4Q9H3Q1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42EP4Q9H3Q1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.85■■□□□ 1.09
CDC42EP4Q9H3Q1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDC42EP4Q9H3Q1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.85■■□□□ 1.09
CDC42EP4Q9H3Q1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42EP4Q9H3Q1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.84■■□□□ 1.09
CDC42EP4Q9H3Q1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42EP4Q9H3Q1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CDC42EP4Q9H3Q1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDC42EP4Q9H3Q1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.84■■□□□ 1.09
CDC42EP4Q9H3Q1 AC104564.3-201ENST00000582367 638 ntBASIC21.84■■□□□ 1.09
CDC42EP4Q9H3Q1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CDC42EP4Q9H3Q1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.84■■□□□ 1.09
CDC42EP4Q9H3Q1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.84■■□□□ 1.09
CDC42EP4Q9H3Q1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.84■■□□□ 1.09
CDC42EP4Q9H3Q1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDC42EP4Q9H3Q1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDC42EP4Q9H3Q1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDC42EP4Q9H3Q1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CDC42EP4Q9H3Q1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CDC42EP4Q9H3Q1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDC42EP4Q9H3Q1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDC42EP4Q9H3Q1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
CDC42EP4Q9H3Q1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.83■■□□□ 1.09
CDC42EP4Q9H3Q1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDC42EP4Q9H3Q1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDC42EP4Q9H3Q1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDC42EP4Q9H3Q1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.08
CDC42EP4Q9H3Q1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.83■■□□□ 1.08
CDC42EP4Q9H3Q1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.83■■□□□ 1.08
CDC42EP4Q9H3Q1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.83■■□□□ 1.08
CDC42EP4Q9H3Q1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.83■■□□□ 1.08
CDC42EP4Q9H3Q1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42EP4Q9H3Q1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42EP4Q9H3Q1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42EP4Q9H3Q1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42EP4Q9H3Q1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42EP4Q9H3Q1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42EP4Q9H3Q1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CDC42EP4Q9H3Q1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.82■■□□□ 1.08
CDC42EP4Q9H3Q1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.82■■□□□ 1.08
CDC42EP4Q9H3Q1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42EP4Q9H3Q1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42EP4Q9H3Q1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.82■■□□□ 1.08
CDC42EP4Q9H3Q1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42EP4Q9H3Q1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42EP4Q9H3Q1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42EP4Q9H3Q1 OR7E47P-201ENST00000546390 1422 ntBASIC21.81■■□□□ 1.08
CDC42EP4Q9H3Q1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42EP4Q9H3Q1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.81■■□□□ 1.08
CDC42EP4Q9H3Q1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
CDC42EP4Q9H3Q1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42EP4Q9H3Q1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42EP4Q9H3Q1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.81■■□□□ 1.08
CDC42EP4Q9H3Q1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.81■■□□□ 1.08
CDC42EP4Q9H3Q1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CDC42EP4Q9H3Q1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42EP4Q9H3Q1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42EP4Q9H3Q1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.81■■□□□ 1.08
CDC42EP4Q9H3Q1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42EP4Q9H3Q1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.81■■□□□ 1.08
CDC42EP4Q9H3Q1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42EP4Q9H3Q1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CDC42EP4Q9H3Q1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.81■■□□□ 1.08
CDC42EP4Q9H3Q1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.8■■□□□ 1.08
CDC42EP4Q9H3Q1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.8■■□□□ 1.08
CDC42EP4Q9H3Q1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42EP4Q9H3Q1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42EP4Q9H3Q1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42EP4Q9H3Q1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.8■■□□□ 1.08
CDC42EP4Q9H3Q1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42EP4Q9H3Q1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42EP4Q9H3Q1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.8■■□□□ 1.08
CDC42EP4Q9H3Q1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42EP4Q9H3Q1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CDC42EP4Q9H3Q1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42EP4Q9H3Q1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42EP4Q9H3Q1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CDC42EP4Q9H3Q1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42EP4Q9H3Q1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CDC42EP4Q9H3Q1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42EP4Q9H3Q1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.79■■□□□ 1.08
CDC42EP4Q9H3Q1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42EP4Q9H3Q1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CDC42EP4Q9H3Q1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
CDC42EP4Q9H3Q1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC42EP4Q9H3Q1 KRT125P-201ENST00000546827 989 ntBASIC21.79■■□□□ 1.08
CDC42EP4Q9H3Q1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms