Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPS4Q9BT78 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COPS4Q9BT78 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COPS4Q9BT78 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPS4Q9BT78 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COPS4Q9BT78 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.62■□□□□ 0.73
COPS4Q9BT78 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
COPS4Q9BT78 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
COPS4Q9BT78 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COPS4Q9BT78 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
COPS4Q9BT78 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.62■□□□□ 0.73
COPS4Q9BT78 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPS4Q9BT78 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPS4Q9BT78 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.62■□□□□ 0.73
COPS4Q9BT78 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPS4Q9BT78 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPS4Q9BT78 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
COPS4Q9BT78 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPS4Q9BT78 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.61■□□□□ 0.73
COPS4Q9BT78 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.61■□□□□ 0.73
COPS4Q9BT78 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COPS4Q9BT78 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPS4Q9BT78 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.61■□□□□ 0.73
COPS4Q9BT78 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPS4Q9BT78 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPS4Q9BT78 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COPS4Q9BT78 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPS4Q9BT78 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPS4Q9BT78 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.6■□□□□ 0.73
COPS4Q9BT78 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPS4Q9BT78 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COPS4Q9BT78 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COPS4Q9BT78 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPS4Q9BT78 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
COPS4Q9BT78 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.6■□□□□ 0.73
COPS4Q9BT78 Z92544.1-202ENST00000571933 1220 ntBASIC19.6■□□□□ 0.73
COPS4Q9BT78 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COPS4Q9BT78 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPS4Q9BT78 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COPS4Q9BT78 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPS4Q9BT78 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COPS4Q9BT78 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COPS4Q9BT78 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPS4Q9BT78 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COPS4Q9BT78 AC092028.1-203ENST00000608262 953 ntBASIC19.59■□□□□ 0.73
COPS4Q9BT78 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.59■□□□□ 0.73
COPS4Q9BT78 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPS4Q9BT78 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COPS4Q9BT78 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPS4Q9BT78 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.59■□□□□ 0.73
COPS4Q9BT78 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COPS4Q9BT78 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPS4Q9BT78 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPS4Q9BT78 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
COPS4Q9BT78 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPS4Q9BT78 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COPS4Q9BT78 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.58■□□□□ 0.72
COPS4Q9BT78 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
COPS4Q9BT78 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.58■□□□□ 0.72
COPS4Q9BT78 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
COPS4Q9BT78 MTDHP2-201ENST00000601468 714 ntBASIC19.58■□□□□ 0.72
COPS4Q9BT78 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COPS4Q9BT78 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COPS4Q9BT78 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COPS4Q9BT78 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COPS4Q9BT78 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.58■□□□□ 0.72
COPS4Q9BT78 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COPS4Q9BT78 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.58■□□□□ 0.72
COPS4Q9BT78 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPS4Q9BT78 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
COPS4Q9BT78 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPS4Q9BT78 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPS4Q9BT78 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPS4Q9BT78 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPS4Q9BT78 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
COPS4Q9BT78 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
COPS4Q9BT78 MIR4787-201ENST00000607364 84 ntBASIC19.57■□□□□ 0.72
COPS4Q9BT78 CA15P2-201ENST00000611168 834 ntBASIC19.57■□□□□ 0.72
COPS4Q9BT78 AC009086.3-201ENST00000623486 1008 ntBASIC19.57■□□□□ 0.72
COPS4Q9BT78 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPS4Q9BT78 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.57■□□□□ 0.72
COPS4Q9BT78 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.57■□□□□ 0.72
COPS4Q9BT78 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COPS4Q9BT78 FP325331.1-202ENST00000623531 1380 ntBASIC19.57■□□□□ 0.72
COPS4Q9BT78 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
COPS4Q9BT78 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPS4Q9BT78 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COPS4Q9BT78 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPS4Q9BT78 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COPS4Q9BT78 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.56■□□□□ 0.72
COPS4Q9BT78 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPS4Q9BT78 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPS4Q9BT78 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COPS4Q9BT78 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
COPS4Q9BT78 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.56■□□□□ 0.72
COPS4Q9BT78 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COPS4Q9BT78 AC239859.2-201ENST00000444165 318 ntBASIC19.56■□□□□ 0.72
COPS4Q9BT78 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COPS4Q9BT78 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.56■□□□□ 0.72
COPS4Q9BT78 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms