Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PCDHB18PQ96TA0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
PCDHB18PQ96TA0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDHB18PQ96TA0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB18PQ96TA0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDHB18PQ96TA0 AC110285.6-201ENST00000617652 491 ntBASIC22.82■■□□□ 1.24
PCDHB18PQ96TA0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.82■■□□□ 1.24
PCDHB18PQ96TA0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB18PQ96TA0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB18PQ96TA0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHB18PQ96TA0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB18PQ96TA0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDHB18PQ96TA0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDHB18PQ96TA0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB18PQ96TA0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB18PQ96TA0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB18PQ96TA0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB18PQ96TA0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB18PQ96TA0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDHB18PQ96TA0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDHB18PQ96TA0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.81■■□□□ 1.24
PCDHB18PQ96TA0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB18PQ96TA0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB18PQ96TA0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDHB18PQ96TA0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHB18PQ96TA0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 AC008764.7-201ENST00000593779 1081 ntBASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 AC106739.1-201ENST00000617035 715 ntBASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 AP004607.7-201ENST00000527152 1677 ntBASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDHB18PQ96TA0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHB18PQ96TA0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHB18PQ96TA0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDHB18PQ96TA0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
PCDHB18PQ96TA0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHB18PQ96TA0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.79■■□□□ 1.24
PCDHB18PQ96TA0 SMUG1P1-201ENST00000590640 811 ntBASIC22.79■■□□□ 1.24
PCDHB18PQ96TA0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
PCDHB18PQ96TA0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
PCDHB18PQ96TA0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHB18PQ96TA0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHB18PQ96TA0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
PCDHB18PQ96TA0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDHB18PQ96TA0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
PCDHB18PQ96TA0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHB18PQ96TA0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
PCDHB18PQ96TA0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDHB18PQ96TA0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHB18PQ96TA0 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.78■■□□□ 1.24
PCDHB18PQ96TA0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDHB18PQ96TA0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDHB18PQ96TA0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.78■■□□□ 1.24
PCDHB18PQ96TA0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDHB18PQ96TA0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHB18PQ96TA0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHB18PQ96TA0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
PCDHB18PQ96TA0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDHB18PQ96TA0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
PCDHB18PQ96TA0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHB18PQ96TA0 AC126544.1-201ENST00000580842 1059 ntBASIC22.77■■□□□ 1.24
PCDHB18PQ96TA0 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.77■■□□□ 1.24
PCDHB18PQ96TA0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDHB18PQ96TA0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
PCDHB18PQ96TA0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDHB18PQ96TA0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHB18PQ96TA0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHB18PQ96TA0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHB18PQ96TA0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDHB18PQ96TA0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDHB18PQ96TA0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
PCDHB18PQ96TA0 Z98882.1-201ENST00000622160 2253 ntBASIC22.77■■□□□ 1.23
PCDHB18PQ96TA0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHB18PQ96TA0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHB18PQ96TA0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.23
PCDHB18PQ96TA0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHB18PQ96TA0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHB18PQ96TA0 AC099791.1-201ENST00000416440 715 ntBASIC22.76■■□□□ 1.23
PCDHB18PQ96TA0 AL031432.3-201ENST00000607698 485 ntBASIC22.76■■□□□ 1.23
PCDHB18PQ96TA0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHB18PQ96TA0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms