Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CDK5RAP1Q96SZ6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.33■■□□□ 1.16
CDK5RAP1Q96SZ6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CDK5RAP1Q96SZ6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.32■■□□□ 1.16
CDK5RAP1Q96SZ6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.32■■□□□ 1.16
CDK5RAP1Q96SZ6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDK5RAP1Q96SZ6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.32■■□□□ 1.16
CDK5RAP1Q96SZ6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDK5RAP1Q96SZ6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.32■■□□□ 1.16
CDK5RAP1Q96SZ6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CDK5RAP1Q96SZ6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CDK5RAP1Q96SZ6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDK5RAP1Q96SZ6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.32■■□□□ 1.16
CDK5RAP1Q96SZ6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.32■■□□□ 1.16
CDK5RAP1Q96SZ6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.31■■□□□ 1.16
CDK5RAP1Q96SZ6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDK5RAP1Q96SZ6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.31■■□□□ 1.16
CDK5RAP1Q96SZ6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.31■■□□□ 1.16
CDK5RAP1Q96SZ6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.31■■□□□ 1.16
CDK5RAP1Q96SZ6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.31■■□□□ 1.16
CDK5RAP1Q96SZ6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.31■■□□□ 1.16
CDK5RAP1Q96SZ6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDK5RAP1Q96SZ6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDK5RAP1Q96SZ6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDK5RAP1Q96SZ6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CDK5RAP1Q96SZ6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.31■■□□□ 1.16
CDK5RAP1Q96SZ6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CDK5RAP1Q96SZ6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDK5RAP1Q96SZ6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDK5RAP1Q96SZ6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.31■■□□□ 1.16
CDK5RAP1Q96SZ6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDK5RAP1Q96SZ6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.3■■□□□ 1.16
CDK5RAP1Q96SZ6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDK5RAP1Q96SZ6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDK5RAP1Q96SZ6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.3■■□□□ 1.16
CDK5RAP1Q96SZ6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDK5RAP1Q96SZ6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDK5RAP1Q96SZ6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDK5RAP1Q96SZ6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.29■■□□□ 1.16
CDK5RAP1Q96SZ6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDK5RAP1Q96SZ6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDK5RAP1Q96SZ6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDK5RAP1Q96SZ6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.29■■□□□ 1.16
CDK5RAP1Q96SZ6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.29■■□□□ 1.16
CDK5RAP1Q96SZ6 KRT18P61-201ENST00000585825 1298 ntBASIC22.29■■□□□ 1.16
CDK5RAP1Q96SZ6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CDK5RAP1Q96SZ6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.29■■□□□ 1.16
CDK5RAP1Q96SZ6 C9orf163-202ENST00000624034 2573 ntBASIC22.29■■□□□ 1.16
CDK5RAP1Q96SZ6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDK5RAP1Q96SZ6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.29■■□□□ 1.16
CDK5RAP1Q96SZ6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDK5RAP1Q96SZ6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.28■■□□□ 1.16
CDK5RAP1Q96SZ6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.28■■□□□ 1.16
CDK5RAP1Q96SZ6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDK5RAP1Q96SZ6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.28■■□□□ 1.16
CDK5RAP1Q96SZ6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.28■■□□□ 1.16
CDK5RAP1Q96SZ6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.28■■□□□ 1.16
CDK5RAP1Q96SZ6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.28■■□□□ 1.16
CDK5RAP1Q96SZ6 AC137761.2-201ENST00000561729 223 ntBASIC22.28■■□□□ 1.16
CDK5RAP1Q96SZ6 AC145350.3-201ENST00000569033 163 ntBASIC22.28■■□□□ 1.16
CDK5RAP1Q96SZ6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.28■■□□□ 1.16
CDK5RAP1Q96SZ6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDK5RAP1Q96SZ6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDK5RAP1Q96SZ6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDK5RAP1Q96SZ6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.28■■□□□ 1.16
CDK5RAP1Q96SZ6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDK5RAP1Q96SZ6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDK5RAP1Q96SZ6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.27■■□□□ 1.16
CDK5RAP1Q96SZ6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDK5RAP1Q96SZ6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.27■■□□□ 1.16
CDK5RAP1Q96SZ6 AC092053.2-201ENST00000640557 1818 ntBASIC22.27■■□□□ 1.16
CDK5RAP1Q96SZ6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDK5RAP1Q96SZ6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDK5RAP1Q96SZ6 AC016769.1-201ENST00000409132 1010 ntBASIC22.27■■□□□ 1.16
CDK5RAP1Q96SZ6 KRT18P11-201ENST00000435214 1283 ntBASIC22.27■■□□□ 1.16
CDK5RAP1Q96SZ6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
CDK5RAP1Q96SZ6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.27■■□□□ 1.16
CDK5RAP1Q96SZ6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDK5RAP1Q96SZ6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CDK5RAP1Q96SZ6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDK5RAP1Q96SZ6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CDK5RAP1Q96SZ6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.26■■□□□ 1.15
CDK5RAP1Q96SZ6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.26■■□□□ 1.15
CDK5RAP1Q96SZ6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
CDK5RAP1Q96SZ6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
CDK5RAP1Q96SZ6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDK5RAP1Q96SZ6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDK5RAP1Q96SZ6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDK5RAP1Q96SZ6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.26■■□□□ 1.15
CDK5RAP1Q96SZ6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CDK5RAP1Q96SZ6 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.26■■□□□ 1.15
CDK5RAP1Q96SZ6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CDK5RAP1Q96SZ6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDK5RAP1Q96SZ6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDK5RAP1Q96SZ6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CDK5RAP1Q96SZ6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDK5RAP1Q96SZ6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDK5RAP1Q96SZ6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDK5RAP1Q96SZ6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.25■■□□□ 1.15
CDK5RAP1Q96SZ6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms