Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB40CQ96S21 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RAB40CQ96S21 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40CQ96S21 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40CQ96S21 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40CQ96S21 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40CQ96S21 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40CQ96S21 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
RAB40CQ96S21 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40CQ96S21 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40CQ96S21 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40CQ96S21 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.37■□□□□ 0.37
RAB40CQ96S21 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB40CQ96S21 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40CQ96S21 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40CQ96S21 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40CQ96S21 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB40CQ96S21 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40CQ96S21 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB40CQ96S21 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
RAB40CQ96S21 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40CQ96S21 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40CQ96S21 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40CQ96S21 MIR6722-201ENST00000617286 78 ntBASIC17.36■□□□□ 0.37
RAB40CQ96S21 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.36■□□□□ 0.37
RAB40CQ96S21 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RAB40CQ96S21 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40CQ96S21 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40CQ96S21 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40CQ96S21 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40CQ96S21 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB40CQ96S21 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB40CQ96S21 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40CQ96S21 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40CQ96S21 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB40CQ96S21 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40CQ96S21 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.35■□□□□ 0.37
RAB40CQ96S21 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.35■□□□□ 0.37
RAB40CQ96S21 AC092667.1-201ENST00000434301 2586 ntBASIC17.35■□□□□ 0.37
RAB40CQ96S21 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40CQ96S21 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB40CQ96S21 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40CQ96S21 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40CQ96S21 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RAB40CQ96S21 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40CQ96S21 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RAB40CQ96S21 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RAB40CQ96S21 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40CQ96S21 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40CQ96S21 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40CQ96S21 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40CQ96S21 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40CQ96S21 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40CQ96S21 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40CQ96S21 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40CQ96S21 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40CQ96S21 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40CQ96S21 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RAB40CQ96S21 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40CQ96S21 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40CQ96S21 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB40CQ96S21 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40CQ96S21 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB40CQ96S21 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RAB40CQ96S21 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40CQ96S21 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
RAB40CQ96S21 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40CQ96S21 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
RAB40CQ96S21 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40CQ96S21 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40CQ96S21 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40CQ96S21 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40CQ96S21 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40CQ96S21 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.33■□□□□ 0.37
RAB40CQ96S21 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RAB40CQ96S21 OXCT2P1-201ENST00000447263 1535 ntBASIC17.33■□□□□ 0.37
RAB40CQ96S21 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
RAB40CQ96S21 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40CQ96S21 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40CQ96S21 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40CQ96S21 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40CQ96S21 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RAB40CQ96S21 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB40CQ96S21 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40CQ96S21 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB40CQ96S21 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RAB40CQ96S21 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40CQ96S21 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB40CQ96S21 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40CQ96S21 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB40CQ96S21 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40CQ96S21 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40CQ96S21 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40CQ96S21 YBX1P4-201ENST00000392794 808 ntBASIC17.32■□□□□ 0.36
RAB40CQ96S21 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB40CQ96S21 MIR4508-201ENST00000584178 70 ntBASIC17.32■□□□□ 0.36
RAB40CQ96S21 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40CQ96S21 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB40CQ96S21 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RAB40CQ96S21 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms