Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZIM3Q96PE6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.95■■□□□ 1.1
ZIM3Q96PE6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
ZIM3Q96PE6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZIM3Q96PE6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
ZIM3Q96PE6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZIM3Q96PE6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.95■■□□□ 1.1
ZIM3Q96PE6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.95■■□□□ 1.1
ZIM3Q96PE6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZIM3Q96PE6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
ZIM3Q96PE6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZIM3Q96PE6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZIM3Q96PE6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ZIM3Q96PE6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZIM3Q96PE6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ZIM3Q96PE6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZIM3Q96PE6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
ZIM3Q96PE6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZIM3Q96PE6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZIM3Q96PE6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
ZIM3Q96PE6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ZIM3Q96PE6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.94■■□□□ 1.1
ZIM3Q96PE6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.94■■□□□ 1.1
ZIM3Q96PE6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZIM3Q96PE6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.94■■□□□ 1.1
ZIM3Q96PE6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ZIM3Q96PE6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZIM3Q96PE6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
ZIM3Q96PE6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
ZIM3Q96PE6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZIM3Q96PE6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZIM3Q96PE6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZIM3Q96PE6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZIM3Q96PE6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZIM3Q96PE6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.93■■□□□ 1.1
ZIM3Q96PE6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.93■■□□□ 1.1
ZIM3Q96PE6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.93■■□□□ 1.1
ZIM3Q96PE6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.93■■□□□ 1.1
ZIM3Q96PE6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
ZIM3Q96PE6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZIM3Q96PE6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ZIM3Q96PE6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
ZIM3Q96PE6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZIM3Q96PE6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.92■■□□□ 1.1
ZIM3Q96PE6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZIM3Q96PE6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZIM3Q96PE6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
ZIM3Q96PE6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZIM3Q96PE6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.92■■□□□ 1.1
ZIM3Q96PE6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZIM3Q96PE6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZIM3Q96PE6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZIM3Q96PE6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
ZIM3Q96PE6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.91■■□□□ 1.1
ZIM3Q96PE6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
ZIM3Q96PE6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.91■■□□□ 1.1
ZIM3Q96PE6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ZIM3Q96PE6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZIM3Q96PE6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
ZIM3Q96PE6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZIM3Q96PE6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
ZIM3Q96PE6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.91■■□□□ 1.1
ZIM3Q96PE6 U85056.1-201ENST00000616429 682 ntBASIC21.91■■□□□ 1.1
ZIM3Q96PE6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.91■■□□□ 1.1
ZIM3Q96PE6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.91■■□□□ 1.1
ZIM3Q96PE6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ZIM3Q96PE6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.91■■□□□ 1.1
ZIM3Q96PE6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
ZIM3Q96PE6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.91■■□□□ 1.1
ZIM3Q96PE6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
ZIM3Q96PE6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.91■■□□□ 1.1
ZIM3Q96PE6 OXCT2P1-201ENST00000447263 1535 ntBASIC21.9■■□□□ 1.1
ZIM3Q96PE6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZIM3Q96PE6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
ZIM3Q96PE6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.9■■□□□ 1.1
ZIM3Q96PE6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZIM3Q96PE6 AC104564.3-201ENST00000582367 638 ntBASIC21.9■■□□□ 1.1
ZIM3Q96PE6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.9■■□□□ 1.1
ZIM3Q96PE6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ZIM3Q96PE6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZIM3Q96PE6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZIM3Q96PE6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
ZIM3Q96PE6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ZIM3Q96PE6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.89■■□□□ 1.1
ZIM3Q96PE6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
ZIM3Q96PE6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.89■■□□□ 1.1
ZIM3Q96PE6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.89■■□□□ 1.1
ZIM3Q96PE6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
ZIM3Q96PE6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ZIM3Q96PE6 AC139795.1-202ENST00000500444 432 ntBASIC21.89■■□□□ 1.09
ZIM3Q96PE6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
ZIM3Q96PE6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
ZIM3Q96PE6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
ZIM3Q96PE6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.89■■□□□ 1.09
ZIM3Q96PE6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ZIM3Q96PE6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
ZIM3Q96PE6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ZIM3Q96PE6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.89■■□□□ 1.09
ZIM3Q96PE6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ZIM3Q96PE6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms