Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PRICKLE1Q96MT3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PRICKLE1Q96MT3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.2■■□□□ 1.14
PRICKLE1Q96MT3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
PRICKLE1Q96MT3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PRICKLE1Q96MT3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PRICKLE1Q96MT3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.2■■□□□ 1.14
PRICKLE1Q96MT3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PRICKLE1Q96MT3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PRICKLE1Q96MT3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PRICKLE1Q96MT3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PRICKLE1Q96MT3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PRICKLE1Q96MT3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PRICKLE1Q96MT3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.2■■□□□ 1.14
PRICKLE1Q96MT3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PRICKLE1Q96MT3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
PRICKLE1Q96MT3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PRICKLE1Q96MT3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PRICKLE1Q96MT3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
PRICKLE1Q96MT3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
PRICKLE1Q96MT3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PRICKLE1Q96MT3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PRICKLE1Q96MT3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PRICKLE1Q96MT3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.19■■□□□ 1.14
PRICKLE1Q96MT3 NTF6G-201ENST00000591094 616 ntBASIC22.19■■□□□ 1.14
PRICKLE1Q96MT3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.19■■□□□ 1.14
PRICKLE1Q96MT3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PRICKLE1Q96MT3 AP004607.7-201ENST00000527152 1677 ntBASIC22.19■■□□□ 1.14
PRICKLE1Q96MT3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PRICKLE1Q96MT3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PRICKLE1Q96MT3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PRICKLE1Q96MT3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PRICKLE1Q96MT3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PRICKLE1Q96MT3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PRICKLE1Q96MT3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PRICKLE1Q96MT3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PRICKLE1Q96MT3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PRICKLE1Q96MT3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PRICKLE1Q96MT3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.18■■□□□ 1.14
PRICKLE1Q96MT3 AC080038.3-201ENST00000623346 1952 ntBASIC22.18■■□□□ 1.14
PRICKLE1Q96MT3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PRICKLE1Q96MT3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PRICKLE1Q96MT3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PRICKLE1Q96MT3 ESRRAP2-201ENST00000418437 1549 ntBASIC22.18■■□□□ 1.14
PRICKLE1Q96MT3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.18■■□□□ 1.14
PRICKLE1Q96MT3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.18■■□□□ 1.14
PRICKLE1Q96MT3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
PRICKLE1Q96MT3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PRICKLE1Q96MT3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.18■■□□□ 1.14
PRICKLE1Q96MT3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.18■■□□□ 1.14
PRICKLE1Q96MT3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.18■■□□□ 1.14
PRICKLE1Q96MT3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PRICKLE1Q96MT3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PRICKLE1Q96MT3 AC127496.7-201ENST00000625110 1798 ntBASIC22.17■■□□□ 1.14
PRICKLE1Q96MT3 AC009237.3-201ENST00000393279 1427 ntBASIC22.17■■□□□ 1.14
PRICKLE1Q96MT3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PRICKLE1Q96MT3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PRICKLE1Q96MT3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
PRICKLE1Q96MT3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PRICKLE1Q96MT3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.17■■□□□ 1.14
PRICKLE1Q96MT3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.17■■□□□ 1.14
PRICKLE1Q96MT3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PRICKLE1Q96MT3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PRICKLE1Q96MT3 AL024507.2-201ENST00000606070 2574 ntBASIC22.17■■□□□ 1.14
PRICKLE1Q96MT3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PRICKLE1Q96MT3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
PRICKLE1Q96MT3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PRICKLE1Q96MT3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PRICKLE1Q96MT3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.16■■□□□ 1.14
PRICKLE1Q96MT3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PRICKLE1Q96MT3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
PRICKLE1Q96MT3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PRICKLE1Q96MT3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PRICKLE1Q96MT3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PRICKLE1Q96MT3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.16■■□□□ 1.14
PRICKLE1Q96MT3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.16■■□□□ 1.14
PRICKLE1Q96MT3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PRICKLE1Q96MT3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.16■■□□□ 1.14
PRICKLE1Q96MT3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
PRICKLE1Q96MT3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
PRICKLE1Q96MT3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PRICKLE1Q96MT3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PRICKLE1Q96MT3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PRICKLE1Q96MT3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PRICKLE1Q96MT3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PRICKLE1Q96MT3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
PRICKLE1Q96MT3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.15■■□□□ 1.14
PRICKLE1Q96MT3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PRICKLE1Q96MT3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PRICKLE1Q96MT3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PRICKLE1Q96MT3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.15■■□□□ 1.14
PRICKLE1Q96MT3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.15■■□□□ 1.14
PRICKLE1Q96MT3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PRICKLE1Q96MT3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PRICKLE1Q96MT3 AC004854.2-201ENST00000608450 1441 ntBASIC22.14■■□□□ 1.14
PRICKLE1Q96MT3 AC055733.4-201ENST00000638462 1354 ntBASIC22.14■■□□□ 1.14
PRICKLE1Q96MT3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PRICKLE1Q96MT3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.13
PRICKLE1Q96MT3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PRICKLE1Q96MT3 AC022517.1-201ENST00000592429 346 ntBASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms