Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTP4Q96DX8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RTP4Q96DX8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RTP4Q96DX8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.96■■□□□ 1.11
RTP4Q96DX8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTP4Q96DX8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTP4Q96DX8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.96■■□□□ 1.11
RTP4Q96DX8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
RTP4Q96DX8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.96■■□□□ 1.11
RTP4Q96DX8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTP4Q96DX8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
RTP4Q96DX8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RTP4Q96DX8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTP4Q96DX8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.95■■□□□ 1.1
RTP4Q96DX8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.95■■□□□ 1.1
RTP4Q96DX8 AL034346.1-201ENST00000568244 1277 ntBASIC21.95■■□□□ 1.1
RTP4Q96DX8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.95■■□□□ 1.1
RTP4Q96DX8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RTP4Q96DX8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTP4Q96DX8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.95■■□□□ 1.1
RTP4Q96DX8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.95■■□□□ 1.1
RTP4Q96DX8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
RTP4Q96DX8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTP4Q96DX8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTP4Q96DX8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTP4Q96DX8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
RTP4Q96DX8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.94■■□□□ 1.1
RTP4Q96DX8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.94■■□□□ 1.1
RTP4Q96DX8 AL136162.1-201ENST00000607711 1078 ntBASIC21.94■■□□□ 1.1
RTP4Q96DX8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTP4Q96DX8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTP4Q96DX8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTP4Q96DX8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTP4Q96DX8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTP4Q96DX8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTP4Q96DX8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTP4Q96DX8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTP4Q96DX8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.93■■□□□ 1.1
RTP4Q96DX8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTP4Q96DX8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.93■■□□□ 1.1
RTP4Q96DX8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.93■■□□□ 1.1
RTP4Q96DX8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.93■■□□□ 1.1
RTP4Q96DX8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTP4Q96DX8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RTP4Q96DX8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RTP4Q96DX8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
RTP4Q96DX8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTP4Q96DX8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTP4Q96DX8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTP4Q96DX8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTP4Q96DX8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
RTP4Q96DX8 AC142381.2-201ENST00000566120 298 ntBASIC21.92■■□□□ 1.1
RTP4Q96DX8 AC104564.3-201ENST00000582367 638 ntBASIC21.92■■□□□ 1.1
RTP4Q96DX8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.92■■□□□ 1.1
RTP4Q96DX8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.92■■□□□ 1.1
RTP4Q96DX8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTP4Q96DX8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.91■■□□□ 1.1
RTP4Q96DX8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTP4Q96DX8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTP4Q96DX8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTP4Q96DX8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.91■■□□□ 1.1
RTP4Q96DX8 AC135279.3-201ENST00000610945 1311 ntBASIC21.91■■□□□ 1.1
RTP4Q96DX8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTP4Q96DX8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RTP4Q96DX8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.91■■□□□ 1.1
RTP4Q96DX8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.91■■□□□ 1.1
RTP4Q96DX8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTP4Q96DX8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTP4Q96DX8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.91■■□□□ 1.1
RTP4Q96DX8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTP4Q96DX8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTP4Q96DX8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTP4Q96DX8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTP4Q96DX8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTP4Q96DX8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTP4Q96DX8 BX842568.3-201ENST00000418104 571 ntBASIC21.9■■□□□ 1.1
RTP4Q96DX8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.9■■□□□ 1.1
RTP4Q96DX8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTP4Q96DX8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.9■■□□□ 1.1
RTP4Q96DX8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTP4Q96DX8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
RTP4Q96DX8 AL031432.3-201ENST00000607698 485 ntBASIC21.9■■□□□ 1.1
RTP4Q96DX8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTP4Q96DX8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.9■■□□□ 1.1
RTP4Q96DX8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.9■■□□□ 1.1
RTP4Q96DX8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTP4Q96DX8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTP4Q96DX8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTP4Q96DX8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.89■■□□□ 1.1
RTP4Q96DX8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTP4Q96DX8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.89■■□□□ 1.1
RTP4Q96DX8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTP4Q96DX8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.89■■□□□ 1.09
RTP4Q96DX8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.89■■□□□ 1.09
RTP4Q96DX8 MIR4767-201ENST00000582827 78 ntBASIC21.89■■□□□ 1.09
RTP4Q96DX8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.89■■□□□ 1.09
RTP4Q96DX8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTP4Q96DX8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.89■■□□□ 1.09
RTP4Q96DX8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTP4Q96DX8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms