Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB39BQ96DA2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB39BQ96DA2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RAB39BQ96DA2 AC004687.1-201ENST00000579003 1625 ntBASIC18.31■□□□□ 0.52
RAB39BQ96DA2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB39BQ96DA2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.31■□□□□ 0.52
RAB39BQ96DA2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB39BQ96DA2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RAB39BQ96DA2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB39BQ96DA2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
RAB39BQ96DA2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB39BQ96DA2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RAB39BQ96DA2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB39BQ96DA2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.31■□□□□ 0.52
RAB39BQ96DA2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB39BQ96DA2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB39BQ96DA2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.31■□□□□ 0.52
RAB39BQ96DA2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB39BQ96DA2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RAB39BQ96DA2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB39BQ96DA2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB39BQ96DA2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.3■□□□□ 0.52
RAB39BQ96DA2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
RAB39BQ96DA2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB39BQ96DA2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB39BQ96DA2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB39BQ96DA2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB39BQ96DA2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB39BQ96DA2 MIR6084-201ENST00000622012 110 ntBASIC18.3■□□□□ 0.52
RAB39BQ96DA2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.3■□□□□ 0.52
RAB39BQ96DA2 AC105233.4-201ENST00000642045 216 ntBASIC18.3■□□□□ 0.52
RAB39BQ96DA2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB39BQ96DA2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB39BQ96DA2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB39BQ96DA2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RAB39BQ96DA2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB39BQ96DA2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB39BQ96DA2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB39BQ96DA2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB39BQ96DA2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.28■□□□□ 0.52
RAB39BQ96DA2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 LINC02228-203ENST00000641970 1355 ntBASIC18.28■□□□□ 0.52
RAB39BQ96DA2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB39BQ96DA2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms