Protein–RNA interactions for Protein: Q96C92

SDCCAG3, Serologically defined colon cancer antigen 3, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3Q96C92 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDCCAG3Q96C92 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.55■□□□□ 0.88
SDCCAG3Q96C92 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDCCAG3Q96C92 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
SDCCAG3Q96C92 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.55■□□□□ 0.88
SDCCAG3Q96C92 AC024257.2-201ENST00000549699 147 ntBASIC20.55■□□□□ 0.88
SDCCAG3Q96C92 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.55■□□□□ 0.88
SDCCAG3Q96C92 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDCCAG3Q96C92 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.55■□□□□ 0.88
SDCCAG3Q96C92 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 SUDS3P1-201ENST00000505831 966 ntBASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
SDCCAG3Q96C92 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 EDA-201ENST00000338901 1233 ntBASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 AL031432.3-201ENST00000607698 485 ntBASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 AC092666.2-201ENST00000613287 246 ntBASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 AL355001.2-201ENST00000620617 1191 ntBASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SDCCAG3Q96C92 AC138932.1-201ENST00000534164 6830 ntBASIC20.52■□□□□ 0.88
SDCCAG3Q96C92 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SDCCAG3Q96C92 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDCCAG3Q96C92 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.52■□□□□ 0.88
SDCCAG3Q96C92 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.52■□□□□ 0.88
SDCCAG3Q96C92 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.52■□□□□ 0.88
SDCCAG3Q96C92 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDCCAG3Q96C92 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDCCAG3Q96C92 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.52■□□□□ 0.88
SDCCAG3Q96C92 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.52■□□□□ 0.88
SDCCAG3Q96C92 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.52■□□□□ 0.88
SDCCAG3Q96C92 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDCCAG3Q96C92 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDCCAG3Q96C92 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDCCAG3Q96C92 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SDCCAG3Q96C92 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.52■□□□□ 0.87
SDCCAG3Q96C92 FAM99A-202ENST00000538190 1989 ntBASIC20.52■□□□□ 0.87
SDCCAG3Q96C92 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
SDCCAG3Q96C92 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDCCAG3Q96C92 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDCCAG3Q96C92 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDCCAG3Q96C92 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDCCAG3Q96C92 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SDCCAG3Q96C92 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.51■□□□□ 0.87
SDCCAG3Q96C92 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.51■□□□□ 0.87
SDCCAG3Q96C92 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.51■□□□□ 0.87
SDCCAG3Q96C92 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SDCCAG3Q96C92 AC087742.1-201ENST00000575880 1738 ntBASIC20.51■□□□□ 0.87
SDCCAG3Q96C92 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.51■□□□□ 0.87
SDCCAG3Q96C92 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDCCAG3Q96C92 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SDCCAG3Q96C92 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDCCAG3Q96C92 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDCCAG3Q96C92 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SDCCAG3Q96C92 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SDCCAG3Q96C92 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDCCAG3Q96C92 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDCCAG3Q96C92 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SDCCAG3Q96C92 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SDCCAG3Q96C92 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SDCCAG3Q96C92 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SDCCAG3Q96C92 AC004448.1-201ENST00000458332 883 ntBASIC20.5■□□□□ 0.87
SDCCAG3Q96C92 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SDCCAG3Q96C92 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.5■□□□□ 0.87
SDCCAG3Q96C92 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDCCAG3Q96C92 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SDCCAG3Q96C92 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SDCCAG3Q96C92 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms