Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 AC016405.3-201ENST00000607710 860 ntBASIC21.71■■□□□ 1.07
CLDN23Q96B33 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CLDN23Q96B33 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN23Q96B33 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN23Q96B33 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLDN23Q96B33 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.7■■□□□ 1.06
CLDN23Q96B33 BX276092.2-201ENST00000417668 665 ntBASIC21.7■■□□□ 1.06
CLDN23Q96B33 AC097658.1-201ENST00000475555 843 ntBASIC21.7■■□□□ 1.06
CLDN23Q96B33 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.7■■□□□ 1.06
CLDN23Q96B33 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.7■■□□□ 1.06
CLDN23Q96B33 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.7■■□□□ 1.06
CLDN23Q96B33 AC053503.5-201ENST00000601508 636 ntBASIC21.7■■□□□ 1.06
CLDN23Q96B33 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CLDN23Q96B33 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.7■■□□□ 1.06
CLDN23Q96B33 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.69■■□□□ 1.06
CLDN23Q96B33 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.69■■□□□ 1.06
CLDN23Q96B33 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN23Q96B33 AC004812.2-201ENST00000611079 2094 ntBASIC21.69■■□□□ 1.06
CLDN23Q96B33 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.69■■□□□ 1.06
CLDN23Q96B33 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.69■■□□□ 1.06
CLDN23Q96B33 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.69■■□□□ 1.06
CLDN23Q96B33 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.69■■□□□ 1.06
CLDN23Q96B33 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN23Q96B33 AP004607.7-201ENST00000527152 1677 ntBASIC21.69■■□□□ 1.06
CLDN23Q96B33 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLDN23Q96B33 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.68■■□□□ 1.06
CLDN23Q96B33 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.68■■□□□ 1.06
CLDN23Q96B33 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN23Q96B33 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.68■■□□□ 1.06
CLDN23Q96B33 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN23Q96B33 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.68■■□□□ 1.06
CLDN23Q96B33 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.68■■□□□ 1.06
CLDN23Q96B33 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN23Q96B33 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CLDN23Q96B33 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN23Q96B33 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CLDN23Q96B33 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN23Q96B33 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLDN23Q96B33 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.68■■□□□ 1.06
CLDN23Q96B33 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN23Q96B33 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.67■■□□□ 1.06
CLDN23Q96B33 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.67■■□□□ 1.06
CLDN23Q96B33 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLDN23Q96B33 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CLDN23Q96B33 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.67■■□□□ 1.06
CLDN23Q96B33 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.67■■□□□ 1.06
CLDN23Q96B33 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.66■■□□□ 1.06
CLDN23Q96B33 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.66■■□□□ 1.06
CLDN23Q96B33 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.66■■□□□ 1.06
CLDN23Q96B33 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN23Q96B33 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN23Q96B33 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.66■■□□□ 1.06
CLDN23Q96B33 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN23Q96B33 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLDN23Q96B33 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CLDN23Q96B33 AL596275.1-201ENST00000423464 877 ntBASIC21.66■■□□□ 1.06
CLDN23Q96B33 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.66■■□□□ 1.06
CLDN23Q96B33 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.66■■□□□ 1.06
CLDN23Q96B33 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.66■■□□□ 1.06
CLDN23Q96B33 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN23Q96B33 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.65■■□□□ 1.06
CLDN23Q96B33 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN23Q96B33 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN23Q96B33 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.65■■□□□ 1.06
CLDN23Q96B33 AC142381.4-202ENST00000563973 229 ntBASIC21.65■■□□□ 1.06
CLDN23Q96B33 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.65■■□□□ 1.06
CLDN23Q96B33 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN23Q96B33 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN23Q96B33 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN23Q96B33 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.64■■□□□ 1.06
CLDN23Q96B33 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLDN23Q96B33 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN23Q96B33 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.64■■□□□ 1.05
CLDN23Q96B33 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.64■■□□□ 1.05
CLDN23Q96B33 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.64■■□□□ 1.05
CLDN23Q96B33 RPS2P4-201ENST00000476944 856 ntBASIC21.64■■□□□ 1.05
CLDN23Q96B33 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.64■■□□□ 1.05
CLDN23Q96B33 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.64■■□□□ 1.05
CLDN23Q96B33 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN23Q96B33 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN23Q96B33 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.64■■□□□ 1.05
CLDN23Q96B33 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN23Q96B33 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN23Q96B33 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN23Q96B33 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN23Q96B33 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN23Q96B33 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CLDN23Q96B33 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN23Q96B33 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.63■■□□□ 1.05
CLDN23Q96B33 AL158047.1-201ENST00000445918 881 ntBASIC21.63■■□□□ 1.05
CLDN23Q96B33 AC128676.1-201ENST00000454392 318 ntBASIC21.63■■□□□ 1.05
CLDN23Q96B33 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN23Q96B33 AC091874.3-201ENST00000512672 1195 ntBASIC21.63■■□□□ 1.05
CLDN23Q96B33 AC006058.3-201ENST00000606217 1069 ntBASIC21.63■■□□□ 1.05
CLDN23Q96B33 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN23Q96B33 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CLDN23Q96B33 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN23Q96B33 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN23Q96B33 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN23Q96B33 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms