Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.43■□□□□ 0.7
HPS1Q92902 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HPS1Q92902 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.43■□□□□ 0.7
HPS1Q92902 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS1Q92902 MIR6722-201ENST00000617286 78 ntBASIC19.43■□□□□ 0.7
HPS1Q92902 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.43■□□□□ 0.7
HPS1Q92902 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HPS1Q92902 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS1Q92902 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS1Q92902 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS1Q92902 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS1Q92902 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS1Q92902 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.43■□□□□ 0.7
HPS1Q92902 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HPS1Q92902 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HPS1Q92902 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.42■□□□□ 0.7
HPS1Q92902 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HPS1Q92902 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS1Q92902 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.42■□□□□ 0.7
HPS1Q92902 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS1Q92902 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.42■□□□□ 0.7
HPS1Q92902 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
HPS1Q92902 AC004448.1-201ENST00000458332 883 ntBASIC19.42■□□□□ 0.7
HPS1Q92902 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.42■□□□□ 0.7
HPS1Q92902 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.42■□□□□ 0.7
HPS1Q92902 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.42■□□□□ 0.7
HPS1Q92902 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.42■□□□□ 0.7
HPS1Q92902 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS1Q92902 AC139530.1-201ENST00000575312 1977 ntBASIC19.42■□□□□ 0.7
HPS1Q92902 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.42■□□□□ 0.7
HPS1Q92902 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HPS1Q92902 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.42■□□□□ 0.7
HPS1Q92902 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS1Q92902 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HPS1Q92902 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS1Q92902 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HPS1Q92902 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS1Q92902 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.42■□□□□ 0.7
HPS1Q92902 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HPS1Q92902 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS1Q92902 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS1Q92902 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
HPS1Q92902 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HPS1Q92902 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HPS1Q92902 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.41■□□□□ 0.7
HPS1Q92902 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.41■□□□□ 0.7
HPS1Q92902 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.41■□□□□ 0.7
HPS1Q92902 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HPS1Q92902 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS1Q92902 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HPS1Q92902 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HPS1Q92902 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS1Q92902 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.4■□□□□ 0.7
HPS1Q92902 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.4■□□□□ 0.7
HPS1Q92902 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS1Q92902 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.4■□□□□ 0.7
HPS1Q92902 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS1Q92902 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HPS1Q92902 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HPS1Q92902 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.4■□□□□ 0.7
HPS1Q92902 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.4■□□□□ 0.7
HPS1Q92902 SNX5-217ENST00000606557 1087 ntBASIC19.4■□□□□ 0.7
HPS1Q92902 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
HPS1Q92902 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
HPS1Q92902 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS1Q92902 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HPS1Q92902 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HPS1Q92902 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
HPS1Q92902 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HPS1Q92902 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS1Q92902 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS1Q92902 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
HPS1Q92902 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.39■□□□□ 0.69
HPS1Q92902 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.39■□□□□ 0.69
HPS1Q92902 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.39■□□□□ 0.69
HPS1Q92902 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS1Q92902 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS1Q92902 AC131274.2-201ENST00000580697 1507 ntBASIC19.39■□□□□ 0.69
HPS1Q92902 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HPS1Q92902 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HPS1Q92902 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
HPS1Q92902 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS1Q92902 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.39■□□□□ 0.69
HPS1Q92902 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS1Q92902 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS1Q92902 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS1Q92902 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS1Q92902 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS1Q92902 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS1Q92902 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS1Q92902 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS1Q92902 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
HPS1Q92902 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS1Q92902 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS1Q92902 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS1Q92902 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPS1Q92902 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
HPS1Q92902 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.38■□□□□ 0.69
HPS1Q92902 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HPS1Q92902 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms