Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
USP6NLQ92738 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.47■■□□□ 1.51
USP6NLQ92738 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
USP6NLQ92738 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
USP6NLQ92738 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.47■■□□□ 1.51
USP6NLQ92738 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
USP6NLQ92738 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
USP6NLQ92738 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
USP6NLQ92738 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
USP6NLQ92738 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC24.46■■□□□ 1.51
USP6NLQ92738 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
USP6NLQ92738 AC007322.4-201ENST00000509611 723 ntBASIC24.46■■□□□ 1.51
USP6NLQ92738 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.46■■□□□ 1.51
USP6NLQ92738 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.45■■□□□ 1.51
USP6NLQ92738 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP6NLQ92738 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.45■■□□□ 1.5
USP6NLQ92738 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP6NLQ92738 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP6NLQ92738 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.45■■□□□ 1.5
USP6NLQ92738 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP6NLQ92738 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP6NLQ92738 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.45■■□□□ 1.5
USP6NLQ92738 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
USP6NLQ92738 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC24.45■■□□□ 1.5
USP6NLQ92738 PPP1R14BP2-201ENST00000426284 444 ntBASIC24.45■■□□□ 1.5
USP6NLQ92738 CYP2T1P-201ENST00000432607 1285 ntBASIC24.45■■□□□ 1.5
USP6NLQ92738 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC24.45■■□□□ 1.5
USP6NLQ92738 EEF1DP3-203ENST00000566025 782 ntBASIC24.45■■□□□ 1.5
USP6NLQ92738 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.45■■□□□ 1.5
USP6NLQ92738 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
USP6NLQ92738 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
USP6NLQ92738 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
USP6NLQ92738 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
USP6NLQ92738 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.44■■□□□ 1.5
USP6NLQ92738 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.44■■□□□ 1.5
USP6NLQ92738 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
USP6NLQ92738 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.44■■□□□ 1.5
USP6NLQ92738 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.44■■□□□ 1.5
USP6NLQ92738 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
USP6NLQ92738 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.44■■□□□ 1.5
USP6NLQ92738 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.44■■□□□ 1.5
USP6NLQ92738 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.44■■□□□ 1.5
USP6NLQ92738 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.43■■□□□ 1.5
USP6NLQ92738 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
USP6NLQ92738 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
USP6NLQ92738 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
USP6NLQ92738 PRORSD1P-201ENST00000295112 541 ntBASIC24.43■■□□□ 1.5
USP6NLQ92738 NAA20-201ENST00000310450 920 ntTSL 2 BASIC24.43■■□□□ 1.5
USP6NLQ92738 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.43■■□□□ 1.5
USP6NLQ92738 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.43■■□□□ 1.5
USP6NLQ92738 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.43■■□□□ 1.5
USP6NLQ92738 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.43■■□□□ 1.5
USP6NLQ92738 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC24.43■■□□□ 1.5
USP6NLQ92738 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC24.43■■□□□ 1.5
USP6NLQ92738 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
USP6NLQ92738 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
USP6NLQ92738 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
USP6NLQ92738 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.43■■□□□ 1.5
USP6NLQ92738 AP004607.7-201ENST00000527152 1677 ntBASIC24.43■■□□□ 1.5
USP6NLQ92738 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
USP6NLQ92738 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
USP6NLQ92738 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
USP6NLQ92738 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.42■■□□□ 1.5
USP6NLQ92738 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
USP6NLQ92738 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
USP6NLQ92738 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
USP6NLQ92738 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
USP6NLQ92738 AC093323.1-202ENST00000635031 2045 ntBASIC24.42■■□□□ 1.5
USP6NLQ92738 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
USP6NLQ92738 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
USP6NLQ92738 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
USP6NLQ92738 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC24.41■■□□□ 1.5
USP6NLQ92738 OR10C1-204ENST00000622521 1039 ntBASIC24.41■■□□□ 1.5
USP6NLQ92738 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
USP6NLQ92738 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
USP6NLQ92738 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
USP6NLQ92738 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
USP6NLQ92738 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
USP6NLQ92738 MKRN4P-201ENST00000444706 1521 ntBASIC24.4■■□□□ 1.5
USP6NLQ92738 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.4■■□□□ 1.5
USP6NLQ92738 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
USP6NLQ92738 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
USP6NLQ92738 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
USP6NLQ92738 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.4■■□□□ 1.5
USP6NLQ92738 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC24.4■■□□□ 1.5
USP6NLQ92738 RNA5SP413-201ENST00000516373 109 ntBASIC24.4■■□□□ 1.5
USP6NLQ92738 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.4■■□□□ 1.5
USP6NLQ92738 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
USP6NLQ92738 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
USP6NLQ92738 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.39■■□□□ 1.49
USP6NLQ92738 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC24.39■■□□□ 1.49
USP6NLQ92738 AL512625.2-201ENST00000417533 625 ntBASIC24.39■■□□□ 1.49
USP6NLQ92738 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.39■■□□□ 1.49
USP6NLQ92738 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
USP6NLQ92738 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC24.39■■□□□ 1.49
USP6NLQ92738 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC24.39■■□□□ 1.49
USP6NLQ92738 AC053503.5-201ENST00000601508 636 ntBASIC24.39■■□□□ 1.49
USP6NLQ92738 AC092118.2-201ENST00000613495 667 ntBASIC24.39■■□□□ 1.49
USP6NLQ92738 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
USP6NLQ92738 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms