Protein–RNA interactions for Protein: Q92729

PTPRU, Receptor-type tyrosine-protein phosphatase U, humanhuman

Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRUQ92729 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
PTPRUQ92729 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
PTPRUQ92729 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
PTPRUQ92729 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC30.33■■■□□ 2.45
PTPRUQ92729 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC30.33■■■□□ 2.45
PTPRUQ92729 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
PTPRUQ92729 AC079089.2-201ENST00000531211 1277 ntBASIC30.33■■■□□ 2.45
PTPRUQ92729 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC30.33■■■□□ 2.45
PTPRUQ92729 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC30.33■■■□□ 2.45
PTPRUQ92729 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC30.33■■■□□ 2.45
PTPRUQ92729 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC30.33■■■□□ 2.45
PTPRUQ92729 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PTPRUQ92729 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC30.33■■■□□ 2.45
PTPRUQ92729 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
PTPRUQ92729 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PTPRUQ92729 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC30.33■■■□□ 2.45
PTPRUQ92729 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC30.33■■■□□ 2.45
PTPRUQ92729 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC30.32■■■□□ 2.44
PTPRUQ92729 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC30.32■■■□□ 2.44
PTPRUQ92729 BET1L-204ENST00000410108 637 ntTSL 3 BASIC30.32■■■□□ 2.44
PTPRUQ92729 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC30.32■■■□□ 2.44
PTPRUQ92729 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC30.32■■■□□ 2.44
PTPRUQ92729 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
PTPRUQ92729 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
PTPRUQ92729 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
PTPRUQ92729 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC30.32■■■□□ 2.44
PTPRUQ92729 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC30.32■■■□□ 2.44
PTPRUQ92729 CREM-210ENST00000374721 2020 ntTSL 5 BASIC30.31■■■□□ 2.44
PTPRUQ92729 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
PTPRUQ92729 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
PTPRUQ92729 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PTPRUQ92729 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC30.31■■■□□ 2.44
PTPRUQ92729 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC30.31■■■□□ 2.44
PTPRUQ92729 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC30.31■■■□□ 2.44
PTPRUQ92729 AC020928.2-201ENST00000588717 2197 ntBASIC30.31■■■□□ 2.44
PTPRUQ92729 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC30.31■■■□□ 2.44
PTPRUQ92729 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
PTPRUQ92729 AP004607.7-201ENST00000527152 1677 ntBASIC30.31■■■□□ 2.44
PTPRUQ92729 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PTPRUQ92729 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
PTPRUQ92729 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC30.3■■■□□ 2.44
PTPRUQ92729 AL512625.2-201ENST00000417533 625 ntBASIC30.3■■■□□ 2.44
PTPRUQ92729 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC30.3■■■□□ 2.44
PTPRUQ92729 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC30.3■■■□□ 2.44
PTPRUQ92729 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC30.3■■■□□ 2.44
PTPRUQ92729 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
PTPRUQ92729 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC30.3■■■□□ 2.44
PTPRUQ92729 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC30.3■■■□□ 2.44
PTPRUQ92729 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC30.3■■■□□ 2.44
PTPRUQ92729 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC30.3■■■□□ 2.44
PTPRUQ92729 AL596275.1-201ENST00000423464 877 ntBASIC30.3■■■□□ 2.44
PTPRUQ92729 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC30.3■■■□□ 2.44
PTPRUQ92729 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
PTPRUQ92729 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC30.29■■■□□ 2.44
PTPRUQ92729 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
PTPRUQ92729 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PTPRUQ92729 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PTPRUQ92729 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
PTPRUQ92729 FXN-202ENST00000396364 980 ntTSL 5 BASIC30.29■■■□□ 2.44
PTPRUQ92729 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC30.29■■■□□ 2.44
PTPRUQ92729 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC30.29■■■□□ 2.44
PTPRUQ92729 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PTPRUQ92729 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PTPRUQ92729 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
PTPRUQ92729 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC30.28■■■□□ 2.44
PTPRUQ92729 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PTPRUQ92729 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PTPRUQ92729 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC30.28■■■□□ 2.44
PTPRUQ92729 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PTPRUQ92729 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PTPRUQ92729 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
PTPRUQ92729 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
PTPRUQ92729 BX276092.2-201ENST00000417668 665 ntBASIC30.28■■■□□ 2.44
PTPRUQ92729 RHEB-204ENST00000472642 900 ntTSL 3 BASIC30.28■■■□□ 2.44
PTPRUQ92729 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PTPRUQ92729 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
PTPRUQ92729 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
PTPRUQ92729 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PTPRUQ92729 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC30.27■■■□□ 2.44
PTPRUQ92729 ESRRAP1-201ENST00000400596 1257 ntBASIC30.27■■■□□ 2.44
PTPRUQ92729 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
PTPRUQ92729 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC30.27■■■□□ 2.44
PTPRUQ92729 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC30.27■■■□□ 2.44
PTPRUQ92729 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC30.27■■■□□ 2.44
PTPRUQ92729 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC30.27■■■□□ 2.44
PTPRUQ92729 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
PTPRUQ92729 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
PTPRUQ92729 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC30.26■■■□□ 2.43
PTPRUQ92729 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PTPRUQ92729 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
PTPRUQ92729 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
PTPRUQ92729 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC30.25■■■□□ 2.43
PTPRUQ92729 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC30.25■■■□□ 2.43
PTPRUQ92729 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC30.25■■■□□ 2.43
PTPRUQ92729 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PTPRUQ92729 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
PTPRUQ92729 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
PTPRUQ92729 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC30.25■■■□□ 2.43
PTPRUQ92729 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
PTPRUQ92729 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms