Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.94■□□□□ 0.94
ATL1Q8WXF7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATL1Q8WXF7 AF213884.3-201ENST00000563833 479 ntBASIC20.94■□□□□ 0.94
ATL1Q8WXF7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.94■□□□□ 0.94
ATL1Q8WXF7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.94■□□□□ 0.94
ATL1Q8WXF7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATL1Q8WXF7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATL1Q8WXF7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATL1Q8WXF7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATL1Q8WXF7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.94■□□□□ 0.94
ATL1Q8WXF7 LINC00565-201ENST00000562710 2331 ntBASIC20.94■□□□□ 0.94
ATL1Q8WXF7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.94■□□□□ 0.94
ATL1Q8WXF7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATL1Q8WXF7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.94■□□□□ 0.94
ATL1Q8WXF7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATL1Q8WXF7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATL1Q8WXF7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.94■□□□□ 0.94
ATL1Q8WXF7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ATL1Q8WXF7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.93■□□□□ 0.94
ATL1Q8WXF7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATL1Q8WXF7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATL1Q8WXF7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATL1Q8WXF7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATL1Q8WXF7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATL1Q8WXF7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATL1Q8WXF7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATL1Q8WXF7 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.93■□□□□ 0.94
ATL1Q8WXF7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ATL1Q8WXF7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
ATL1Q8WXF7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATL1Q8WXF7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATL1Q8WXF7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATL1Q8WXF7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.93■□□□□ 0.94
ATL1Q8WXF7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATL1Q8WXF7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATL1Q8WXF7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATL1Q8WXF7 FAM99A-202ENST00000538190 1989 ntBASIC20.92■□□□□ 0.94
ATL1Q8WXF7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
ATL1Q8WXF7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATL1Q8WXF7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATL1Q8WXF7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.92■□□□□ 0.94
ATL1Q8WXF7 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.92■□□□□ 0.94
ATL1Q8WXF7 AL031432.3-201ENST00000607698 485 ntBASIC20.92■□□□□ 0.94
ATL1Q8WXF7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATL1Q8WXF7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATL1Q8WXF7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATL1Q8WXF7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATL1Q8WXF7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATL1Q8WXF7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATL1Q8WXF7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATL1Q8WXF7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATL1Q8WXF7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
ATL1Q8WXF7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATL1Q8WXF7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.91■□□□□ 0.94
ATL1Q8WXF7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATL1Q8WXF7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ATL1Q8WXF7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATL1Q8WXF7 TSPY26P-201ENST00000476365 1326 ntBASIC20.91■□□□□ 0.94
ATL1Q8WXF7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.91■□□□□ 0.94
ATL1Q8WXF7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATL1Q8WXF7 AL136967.2-201ENST00000623968 743 ntBASIC20.91■□□□□ 0.94
ATL1Q8WXF7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATL1Q8WXF7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.9■□□□□ 0.94
ATL1Q8WXF7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATL1Q8WXF7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATL1Q8WXF7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATL1Q8WXF7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATL1Q8WXF7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATL1Q8WXF7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATL1Q8WXF7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.9■□□□□ 0.94
ATL1Q8WXF7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATL1Q8WXF7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATL1Q8WXF7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.9■□□□□ 0.94
ATL1Q8WXF7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATL1Q8WXF7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATL1Q8WXF7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.94
ATL1Q8WXF7 AP004607.7-201ENST00000527152 1677 ntBASIC20.89■□□□□ 0.94
ATL1Q8WXF7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ATL1Q8WXF7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.89■□□□□ 0.94
ATL1Q8WXF7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
ATL1Q8WXF7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ATL1Q8WXF7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATL1Q8WXF7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
ATL1Q8WXF7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.89■□□□□ 0.93
ATL1Q8WXF7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.89■□□□□ 0.93
ATL1Q8WXF7 SUDS3P1-201ENST00000505831 966 ntBASIC20.89■□□□□ 0.93
ATL1Q8WXF7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.89■□□□□ 0.93
ATL1Q8WXF7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.89■□□□□ 0.93
ATL1Q8WXF7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
ATL1Q8WXF7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATL1Q8WXF7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATL1Q8WXF7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATL1Q8WXF7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATL1Q8WXF7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATL1Q8WXF7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.88■□□□□ 0.93
ATL1Q8WXF7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ATL1Q8WXF7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATL1Q8WXF7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATL1Q8WXF7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.88■□□□□ 0.93
ATL1Q8WXF7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms