Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF138Q8WVD3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
RNF138Q8WVD3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF138Q8WVD3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.56■□□□□ 0.72
RNF138Q8WVD3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF138Q8WVD3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF138Q8WVD3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.56■□□□□ 0.72
RNF138Q8WVD3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF138Q8WVD3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
RNF138Q8WVD3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF138Q8WVD3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF138Q8WVD3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF138Q8WVD3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF138Q8WVD3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RNF138Q8WVD3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF138Q8WVD3 FAM99A-202ENST00000538190 1989 ntBASIC19.55■□□□□ 0.72
RNF138Q8WVD3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF138Q8WVD3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF138Q8WVD3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF138Q8WVD3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF138Q8WVD3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF138Q8WVD3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF138Q8WVD3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF138Q8WVD3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF138Q8WVD3 MIR935-201ENST00000401179 91 ntBASIC19.55■□□□□ 0.72
RNF138Q8WVD3 AC034268.1-201ENST00000441047 882 ntBASIC19.55■□□□□ 0.72
RNF138Q8WVD3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.55■□□□□ 0.72
RNF138Q8WVD3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF138Q8WVD3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
RNF138Q8WVD3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RNF138Q8WVD3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF138Q8WVD3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF138Q8WVD3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF138Q8WVD3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF138Q8WVD3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF138Q8WVD3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF138Q8WVD3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF138Q8WVD3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF138Q8WVD3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
RNF138Q8WVD3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.54■□□□□ 0.72
RNF138Q8WVD3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF138Q8WVD3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF138Q8WVD3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF138Q8WVD3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF138Q8WVD3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF138Q8WVD3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF138Q8WVD3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF138Q8WVD3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF138Q8WVD3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF138Q8WVD3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF138Q8WVD3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF138Q8WVD3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF138Q8WVD3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.53■□□□□ 0.72
RNF138Q8WVD3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF138Q8WVD3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF138Q8WVD3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF138Q8WVD3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF138Q8WVD3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF138Q8WVD3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF138Q8WVD3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF138Q8WVD3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF138Q8WVD3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF138Q8WVD3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF138Q8WVD3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF138Q8WVD3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF138Q8WVD3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF138Q8WVD3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF138Q8WVD3 KRT18P61-201ENST00000585825 1298 ntBASIC19.52■□□□□ 0.72
RNF138Q8WVD3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF138Q8WVD3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.52■□□□□ 0.71
RNF138Q8WVD3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RNF138Q8WVD3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RNF138Q8WVD3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF138Q8WVD3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF138Q8WVD3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF138Q8WVD3 C11orf96-202ENST00000528572 1834 ntBASIC19.51■□□□□ 0.71
RNF138Q8WVD3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RNF138Q8WVD3 AC026471.6-201ENST00000622954 1905 ntBASIC19.51■□□□□ 0.71
RNF138Q8WVD3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF138Q8WVD3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF138Q8WVD3 MIR5787-201ENST00000611784 55 ntBASIC19.51■□□□□ 0.71
RNF138Q8WVD3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF138Q8WVD3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF138Q8WVD3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF138Q8WVD3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RNF138Q8WVD3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF138Q8WVD3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RNF138Q8WVD3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF138Q8WVD3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF138Q8WVD3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF138Q8WVD3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF138Q8WVD3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF138Q8WVD3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
RNF138Q8WVD3 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF138Q8WVD3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF138Q8WVD3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF138Q8WVD3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF138Q8WVD3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF138Q8WVD3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF138Q8WVD3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms