Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC034268.1-201ENST00000441047 882 ntBASIC22.53■■□□□ 1.2
RNF139Q8WU17 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.53■■□□□ 1.2
RNF139Q8WU17 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF139Q8WU17 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RNF139Q8WU17 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.53■■□□□ 1.2
RNF139Q8WU17 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF139Q8WU17 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF139Q8WU17 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF139Q8WU17 AP004607.7-201ENST00000527152 1677 ntBASIC22.52■■□□□ 1.2
RNF139Q8WU17 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF139Q8WU17 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF139Q8WU17 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF139Q8WU17 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF139Q8WU17 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF139Q8WU17 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
RNF139Q8WU17 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.52■■□□□ 1.2
RNF139Q8WU17 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF139Q8WU17 CCDC92B-201ENST00000575506 885 ntBASIC22.52■■□□□ 1.2
RNF139Q8WU17 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF139Q8WU17 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF139Q8WU17 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF139Q8WU17 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF139Q8WU17 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF139Q8WU17 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF139Q8WU17 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF139Q8WU17 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
RNF139Q8WU17 AC009237.3-201ENST00000393279 1427 ntBASIC22.51■■□□□ 1.19
RNF139Q8WU17 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF139Q8WU17 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.51■■□□□ 1.19
RNF139Q8WU17 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.51■■□□□ 1.19
RNF139Q8WU17 AL034346.1-201ENST00000568244 1277 ntBASIC22.51■■□□□ 1.19
RNF139Q8WU17 TPRG1LP1-201ENST00000598702 760 ntBASIC22.51■■□□□ 1.19
RNF139Q8WU17 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.51■■□□□ 1.19
RNF139Q8WU17 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF139Q8WU17 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.51■■□□□ 1.19
RNF139Q8WU17 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF139Q8WU17 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.5■■□□□ 1.19
RNF139Q8WU17 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RNF139Q8WU17 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF139Q8WU17 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.5■■□□□ 1.19
RNF139Q8WU17 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF139Q8WU17 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF139Q8WU17 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF139Q8WU17 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
RNF139Q8WU17 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF139Q8WU17 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF139Q8WU17 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.5■■□□□ 1.19
RNF139Q8WU17 AC079834.2-201ENST00000609776 1949 ntBASIC22.5■■□□□ 1.19
RNF139Q8WU17 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RNF139Q8WU17 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.5■■□□□ 1.19
RNF139Q8WU17 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF139Q8WU17 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF139Q8WU17 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.49■■□□□ 1.19
RNF139Q8WU17 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF139Q8WU17 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF139Q8WU17 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF139Q8WU17 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF139Q8WU17 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF139Q8WU17 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF139Q8WU17 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
RNF139Q8WU17 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
RNF139Q8WU17 KRT18P14-201ENST00000534205 1250 ntBASIC22.49■■□□□ 1.19
RNF139Q8WU17 TERF1P2-201ENST00000583350 1212 ntBASIC22.49■■□□□ 1.19
RNF139Q8WU17 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.49■■□□□ 1.19
RNF139Q8WU17 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF139Q8WU17 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF139Q8WU17 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.49■■□□□ 1.19
RNF139Q8WU17 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
RNF139Q8WU17 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
RNF139Q8WU17 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.48■■□□□ 1.19
RNF139Q8WU17 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.48■■□□□ 1.19
RNF139Q8WU17 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.48■■□□□ 1.19
RNF139Q8WU17 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
RNF139Q8WU17 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF139Q8WU17 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
RNF139Q8WU17 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
RNF139Q8WU17 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.48■■□□□ 1.19
RNF139Q8WU17 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.48■■□□□ 1.19
RNF139Q8WU17 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RNF139Q8WU17 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF139Q8WU17 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RNF139Q8WU17 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF139Q8WU17 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
RNF139Q8WU17 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
RNF139Q8WU17 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF139Q8WU17 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF139Q8WU17 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.48■■□□□ 1.19
RNF139Q8WU17 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
RNF139Q8WU17 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF139Q8WU17 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.47■■□□□ 1.19
RNF139Q8WU17 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF139Q8WU17 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.47■■□□□ 1.19
RNF139Q8WU17 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RNF139Q8WU17 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RNF139Q8WU17 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.47■■□□□ 1.19
RNF139Q8WU17 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RNF139Q8WU17 DUX4L2-201ENST00000561772 1275 ntBASIC22.47■■□□□ 1.19
RNF139Q8WU17 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.47■■□□□ 1.19
RNF139Q8WU17 DUX4L6-201ENST00000626483 1275 ntBASIC22.47■■□□□ 1.19
RNF139Q8WU17 DUX4L1-201ENST00000627662 1275 ntBASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms