Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNED1Q8TER0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC26.39■■□□□ 1.82
SNED1Q8TER0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNED1Q8TER0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNED1Q8TER0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC26.39■■□□□ 1.82
SNED1Q8TER0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.39■■□□□ 1.82
SNED1Q8TER0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
SNED1Q8TER0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNED1Q8TER0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNED1Q8TER0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
SNED1Q8TER0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC26.39■■□□□ 1.81
SNED1Q8TER0 RARRES2P4-201ENST00000514074 484 ntBASIC26.39■■□□□ 1.81
SNED1Q8TER0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SNED1Q8TER0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.38■■□□□ 1.81
SNED1Q8TER0 MKRN4P-201ENST00000444706 1521 ntBASIC26.38■■□□□ 1.81
SNED1Q8TER0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SNED1Q8TER0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.38■■□□□ 1.81
SNED1Q8TER0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SNED1Q8TER0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNED1Q8TER0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.38■■□□□ 1.81
SNED1Q8TER0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNED1Q8TER0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC26.38■■□□□ 1.81
SNED1Q8TER0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNED1Q8TER0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNED1Q8TER0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNED1Q8TER0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
SNED1Q8TER0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.37■■□□□ 1.81
SNED1Q8TER0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
SNED1Q8TER0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SNED1Q8TER0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SNED1Q8TER0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
SNED1Q8TER0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.37■■□□□ 1.81
SNED1Q8TER0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SNED1Q8TER0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
SNED1Q8TER0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SNED1Q8TER0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SNED1Q8TER0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
SNED1Q8TER0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SNED1Q8TER0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
SNED1Q8TER0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SNED1Q8TER0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SNED1Q8TER0 AC079089.2-201ENST00000531211 1277 ntBASIC26.36■■□□□ 1.81
SNED1Q8TER0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.36■■□□□ 1.81
SNED1Q8TER0 OR10C1-204ENST00000622521 1039 ntBASIC26.36■■□□□ 1.81
SNED1Q8TER0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
SNED1Q8TER0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SNED1Q8TER0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SNED1Q8TER0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
SNED1Q8TER0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
SNED1Q8TER0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SNED1Q8TER0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SNED1Q8TER0 ADM-205ENST00000528544 586 ntTSL 2 BASIC26.35■■□□□ 1.81
SNED1Q8TER0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC26.35■■□□□ 1.81
SNED1Q8TER0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC26.35■■□□□ 1.81
SNED1Q8TER0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SNED1Q8TER0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SNED1Q8TER0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.35■■□□□ 1.81
SNED1Q8TER0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SNED1Q8TER0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
SNED1Q8TER0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SNED1Q8TER0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
SNED1Q8TER0 KRT18P29-201ENST00000397031 1267 ntBASIC26.34■■□□□ 1.81
SNED1Q8TER0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC26.34■■□□□ 1.81
SNED1Q8TER0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC26.34■■□□□ 1.81
SNED1Q8TER0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SNED1Q8TER0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC26.34■■□□□ 1.81
SNED1Q8TER0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.34■■□□□ 1.81
SNED1Q8TER0 AC016405.3-201ENST00000607710 860 ntBASIC26.34■■□□□ 1.81
SNED1Q8TER0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC26.34■■□□□ 1.81
SNED1Q8TER0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SNED1Q8TER0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.34■■□□□ 1.81
SNED1Q8TER0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SNED1Q8TER0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.34■■□□□ 1.81
SNED1Q8TER0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SNED1Q8TER0 FXN-202ENST00000396364 980 ntTSL 5 BASIC26.33■■□□□ 1.81
SNED1Q8TER0 AL512625.2-201ENST00000417533 625 ntBASIC26.33■■□□□ 1.81
SNED1Q8TER0 GCSHP5-201ENST00000443090 522 ntBASIC26.33■■□□□ 1.81
SNED1Q8TER0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC26.33■■□□□ 1.81
SNED1Q8TER0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SNED1Q8TER0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNED1Q8TER0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC26.32■■□□□ 1.8
SNED1Q8TER0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNED1Q8TER0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
SNED1Q8TER0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNED1Q8TER0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNED1Q8TER0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNED1Q8TER0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
SNED1Q8TER0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC26.31■■□□□ 1.8
SNED1Q8TER0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC26.31■■□□□ 1.8
SNED1Q8TER0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC26.31■■□□□ 1.8
SNED1Q8TER0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
SNED1Q8TER0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC26.31■■□□□ 1.8
SNED1Q8TER0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNED1Q8TER0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNED1Q8TER0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SNED1Q8TER0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNED1Q8TER0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNED1Q8TER0 AP004607.7-201ENST00000527152 1677 ntBASIC26.31■■□□□ 1.8
SNED1Q8TER0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.31■■□□□ 1.8
SNED1Q8TER0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms