Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LINC01006Q8NI28 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01006Q8NI28 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.81■□□□□ 0.28
LINC01006Q8NI28 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.81■□□□□ 0.28
LINC01006Q8NI28 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.81■□□□□ 0.28
LINC01006Q8NI28 AC105036.2-201ENST00000569468 176 ntBASIC16.81■□□□□ 0.28
LINC01006Q8NI28 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01006Q8NI28 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01006Q8NI28 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01006Q8NI28 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01006Q8NI28 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.8■□□□□ 0.28
LINC01006Q8NI28 LINC00526-201ENST00000581067 1875 ntBASIC16.8■□□□□ 0.28
LINC01006Q8NI28 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LINC01006Q8NI28 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.8■□□□□ 0.28
LINC01006Q8NI28 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01006Q8NI28 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
LINC01006Q8NI28 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01006Q8NI28 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01006Q8NI28 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.8■□□□□ 0.28
LINC01006Q8NI28 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01006Q8NI28 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01006Q8NI28 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01006Q8NI28 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.8■□□□□ 0.28
LINC01006Q8NI28 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LINC01006Q8NI28 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.8■□□□□ 0.28
LINC01006Q8NI28 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.8■□□□□ 0.28
LINC01006Q8NI28 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01006Q8NI28 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.79■□□□□ 0.28
LINC01006Q8NI28 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01006Q8NI28 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01006Q8NI28 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01006Q8NI28 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01006Q8NI28 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.79■□□□□ 0.28
LINC01006Q8NI28 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01006Q8NI28 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.79■□□□□ 0.28
LINC01006Q8NI28 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.79■□□□□ 0.28
LINC01006Q8NI28 AC069152.1-201ENST00000438030 544 ntBASIC16.79■□□□□ 0.28
LINC01006Q8NI28 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01006Q8NI28 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01006Q8NI28 SLC7A5P1-201ENST00000568957 537 ntBASIC16.79■□□□□ 0.28
LINC01006Q8NI28 AC013268.1-206ENST00000638368 961 ntBASIC16.79■□□□□ 0.28
LINC01006Q8NI28 AC112229.1-201ENST00000639295 961 ntBASIC16.79■□□□□ 0.28
LINC01006Q8NI28 AC133041.1-202ENST00000642053 222 ntBASIC16.79■□□□□ 0.28
LINC01006Q8NI28 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01006Q8NI28 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.79■□□□□ 0.28
LINC01006Q8NI28 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01006Q8NI28 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.79■□□□□ 0.28
LINC01006Q8NI28 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LINC01006Q8NI28 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 EEF1DP3-203ENST00000566025 782 ntBASIC16.78■□□□□ 0.28
LINC01006Q8NI28 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
LINC01006Q8NI28 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
LINC01006Q8NI28 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LINC01006Q8NI28 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LINC01006Q8NI28 AC073210.2-201ENST00000430369 194 ntBASIC16.77■□□□□ 0.28
LINC01006Q8NI28 TERF1P5-201ENST00000477545 1207 ntBASIC16.77■□□□□ 0.28
LINC01006Q8NI28 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.77■□□□□ 0.28
LINC01006Q8NI28 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LINC01006Q8NI28 AC053503.5-201ENST00000601508 636 ntBASIC16.77■□□□□ 0.28
LINC01006Q8NI28 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01006Q8NI28 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC01006Q8NI28 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC01006Q8NI28 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC01006Q8NI28 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.77■□□□□ 0.27
LINC01006Q8NI28 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LINC01006Q8NI28 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LINC01006Q8NI28 AP006587.3-201ENST00000525742 1516 ntBASIC16.76■□□□□ 0.27
LINC01006Q8NI28 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01006Q8NI28 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC01006Q8NI28 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01006Q8NI28 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.76■□□□□ 0.27
LINC01006Q8NI28 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC01006Q8NI28 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
LINC01006Q8NI28 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC01006Q8NI28 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC01006Q8NI28 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.76■□□□□ 0.27
LINC01006Q8NI28 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01006Q8NI28 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01006Q8NI28 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01006Q8NI28 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LINC01006Q8NI28 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LINC01006Q8NI28 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms