Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 LINC00565-201ENST00000562710 2331 ntBASIC28.34■■■□□ 2.13
NGEFQ8N5V2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
NGEFQ8N5V2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
NGEFQ8N5V2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
NGEFQ8N5V2 AC012414.1-201ENST00000556676 535 ntBASIC28.34■■■□□ 2.13
NGEFQ8N5V2 SMUG1P1-201ENST00000590640 811 ntBASIC28.34■■■□□ 2.13
NGEFQ8N5V2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
NGEFQ8N5V2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC28.34■■■□□ 2.13
NGEFQ8N5V2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NGEFQ8N5V2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
NGEFQ8N5V2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
NGEFQ8N5V2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
NGEFQ8N5V2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC28.33■■■□□ 2.13
NGEFQ8N5V2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
NGEFQ8N5V2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NGEFQ8N5V2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NGEFQ8N5V2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
NGEFQ8N5V2 DUX4L2-201ENST00000561772 1275 ntBASIC28.33■■■□□ 2.13
NGEFQ8N5V2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC28.33■■■□□ 2.13
NGEFQ8N5V2 IKBKGP1-201ENST00000612193 1073 ntBASIC28.33■■■□□ 2.13
NGEFQ8N5V2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC28.33■■■□□ 2.13
NGEFQ8N5V2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC28.33■■■□□ 2.13
NGEFQ8N5V2 AL358852.1-201ENST00000623174 1268 ntBASIC28.33■■■□□ 2.13
NGEFQ8N5V2 DUX4L6-201ENST00000626483 1275 ntBASIC28.33■■■□□ 2.13
NGEFQ8N5V2 DUX4L1-201ENST00000627662 1275 ntBASIC28.33■■■□□ 2.13
NGEFQ8N5V2 DUX4L8-201ENST00000629013 1275 ntBASIC28.33■■■□□ 2.13
NGEFQ8N5V2 DUX4L3-201ENST00000630187 1275 ntBASIC28.33■■■□□ 2.13
NGEFQ8N5V2 DUX4L7-201ENST00000630678 1275 ntBASIC28.33■■■□□ 2.13
NGEFQ8N5V2 DUX4L5-201ENST00000630834 1275 ntBASIC28.33■■■□□ 2.13
NGEFQ8N5V2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
NGEFQ8N5V2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
NGEFQ8N5V2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC28.33■■■□□ 2.12
NGEFQ8N5V2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
NGEFQ8N5V2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
NGEFQ8N5V2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NGEFQ8N5V2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NGEFQ8N5V2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
NGEFQ8N5V2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC28.32■■■□□ 2.12
NGEFQ8N5V2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
NGEFQ8N5V2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NGEFQ8N5V2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
NGEFQ8N5V2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NGEFQ8N5V2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
NGEFQ8N5V2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC28.31■■■□□ 2.12
NGEFQ8N5V2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
NGEFQ8N5V2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC28.31■■■□□ 2.12
NGEFQ8N5V2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
NGEFQ8N5V2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
NGEFQ8N5V2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC28.31■■■□□ 2.12
NGEFQ8N5V2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC28.31■■■□□ 2.12
NGEFQ8N5V2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
NGEFQ8N5V2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NGEFQ8N5V2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
NGEFQ8N5V2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC28.3■■■□□ 2.12
NGEFQ8N5V2 BID-212ENST00000614949 1988 ntTSL 5 BASIC28.3■■■□□ 2.12
NGEFQ8N5V2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NGEFQ8N5V2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
NGEFQ8N5V2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC28.3■■■□□ 2.12
NGEFQ8N5V2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC28.3■■■□□ 2.12
NGEFQ8N5V2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC28.3■■■□□ 2.12
NGEFQ8N5V2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC28.3■■■□□ 2.12
NGEFQ8N5V2 KRT18P5-201ENST00000436075 1291 ntBASIC28.3■■■□□ 2.12
NGEFQ8N5V2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC28.3■■■□□ 2.12
NGEFQ8N5V2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC28.3■■■□□ 2.12
NGEFQ8N5V2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
NGEFQ8N5V2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC28.3■■■□□ 2.12
NGEFQ8N5V2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC28.3■■■□□ 2.12
NGEFQ8N5V2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
NGEFQ8N5V2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NGEFQ8N5V2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NGEFQ8N5V2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
NGEFQ8N5V2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NGEFQ8N5V2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC28.29■■■□□ 2.12
NGEFQ8N5V2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NGEFQ8N5V2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NGEFQ8N5V2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC28.29■■■□□ 2.12
NGEFQ8N5V2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NGEFQ8N5V2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
NGEFQ8N5V2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC28.29■■■□□ 2.12
NGEFQ8N5V2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
NGEFQ8N5V2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC28.29■■■□□ 2.12
NGEFQ8N5V2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
NGEFQ8N5V2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC28.28■■■□□ 2.12
NGEFQ8N5V2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
NGEFQ8N5V2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
NGEFQ8N5V2 AC027612.3-201ENST00000413684 1047 ntBASIC28.28■■■□□ 2.12
NGEFQ8N5V2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC28.28■■■□□ 2.12
NGEFQ8N5V2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC28.28■■■□□ 2.12
NGEFQ8N5V2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
NGEFQ8N5V2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
NGEFQ8N5V2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NGEFQ8N5V2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
NGEFQ8N5V2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
NGEFQ8N5V2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
NGEFQ8N5V2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
NGEFQ8N5V2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
NGEFQ8N5V2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
NGEFQ8N5V2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
NGEFQ8N5V2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
NGEFQ8N5V2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms