Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
ARHGEF39Q8N4T4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.36■□□□□ 0.85
ARHGEF39Q8N4T4 AP006587.3-201ENST00000525742 1516 ntBASIC20.36■□□□□ 0.85
ARHGEF39Q8N4T4 AC242852.2-201ENST00000615738 1807 ntBASIC20.36■□□□□ 0.85
ARHGEF39Q8N4T4 AC092053.2-201ENST00000640557 1818 ntBASIC20.36■□□□□ 0.85
ARHGEF39Q8N4T4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.36■□□□□ 0.85
ARHGEF39Q8N4T4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF39Q8N4T4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ARHGEF39Q8N4T4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF39Q8N4T4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ARHGEF39Q8N4T4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.35■□□□□ 0.85
ARHGEF39Q8N4T4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
ARHGEF39Q8N4T4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF39Q8N4T4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ARHGEF39Q8N4T4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF39Q8N4T4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF39Q8N4T4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.35■□□□□ 0.85
ARHGEF39Q8N4T4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF39Q8N4T4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ARHGEF39Q8N4T4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.35■□□□□ 0.85
ARHGEF39Q8N4T4 AP004607.4-201ENST00000530158 1459 ntBASIC20.35■□□□□ 0.85
ARHGEF39Q8N4T4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ARHGEF39Q8N4T4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 AC133561.1-201ENST00000568600 2415 ntBASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 NTF6G-201ENST00000591094 616 ntBASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ARHGEF39Q8N4T4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF39Q8N4T4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF39Q8N4T4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF39Q8N4T4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.33■□□□□ 0.85
ARHGEF39Q8N4T4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.33■□□□□ 0.85
ARHGEF39Q8N4T4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.33■□□□□ 0.85
ARHGEF39Q8N4T4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF39Q8N4T4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ARHGEF39Q8N4T4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.33■□□□□ 0.85
ARHGEF39Q8N4T4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
ARHGEF39Q8N4T4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ARHGEF39Q8N4T4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ARHGEF39Q8N4T4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.32■□□□□ 0.84
ARHGEF39Q8N4T4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF39Q8N4T4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF39Q8N4T4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF39Q8N4T4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF39Q8N4T4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ARHGEF39Q8N4T4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF39Q8N4T4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.32■□□□□ 0.84
ARHGEF39Q8N4T4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.32■□□□□ 0.84
ARHGEF39Q8N4T4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF39Q8N4T4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF39Q8N4T4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF39Q8N4T4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF39Q8N4T4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ARHGEF39Q8N4T4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 ECEL1P1-201ENST00000373592 1742 ntBASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 AC004854.2-201ENST00000608450 1441 ntBASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 AC079140.4-201ENST00000507448 529 ntBASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.31■□□□□ 0.84
ARHGEF39Q8N4T4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ARHGEF39Q8N4T4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARHGEF39Q8N4T4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ARHGEF39Q8N4T4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ARHGEF39Q8N4T4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ARHGEF39Q8N4T4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.3■□□□□ 0.84
ARHGEF39Q8N4T4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.3■□□□□ 0.84
ARHGEF39Q8N4T4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.3■□□□□ 0.84
ARHGEF39Q8N4T4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms