Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.44■□□□□ 0.7
RP1L1Q8IWN7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RP1L1Q8IWN7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RP1L1Q8IWN7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.44■□□□□ 0.7
RP1L1Q8IWN7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.43■□□□□ 0.7
RP1L1Q8IWN7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RP1L1Q8IWN7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RP1L1Q8IWN7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.43■□□□□ 0.7
RP1L1Q8IWN7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.43■□□□□ 0.7
RP1L1Q8IWN7 AC010536.3-201ENST00000620306 533 ntBASIC19.43■□□□□ 0.7
RP1L1Q8IWN7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RP1L1Q8IWN7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.43■□□□□ 0.7
RP1L1Q8IWN7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RP1L1Q8IWN7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RP1L1Q8IWN7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RP1L1Q8IWN7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RP1L1Q8IWN7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RP1L1Q8IWN7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RP1L1Q8IWN7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.42■□□□□ 0.7
RP1L1Q8IWN7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RP1L1Q8IWN7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RP1L1Q8IWN7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RP1L1Q8IWN7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RP1L1Q8IWN7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.42■□□□□ 0.7
RP1L1Q8IWN7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.42■□□□□ 0.7
RP1L1Q8IWN7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RP1L1Q8IWN7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RP1L1Q8IWN7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RP1L1Q8IWN7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RP1L1Q8IWN7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RP1L1Q8IWN7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RP1L1Q8IWN7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.41■□□□□ 0.7
RP1L1Q8IWN7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.41■□□□□ 0.7
RP1L1Q8IWN7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RP1L1Q8IWN7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RP1L1Q8IWN7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RP1L1Q8IWN7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
RP1L1Q8IWN7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.41■□□□□ 0.7
RP1L1Q8IWN7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RP1L1Q8IWN7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RP1L1Q8IWN7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.41■□□□□ 0.7
RP1L1Q8IWN7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RP1L1Q8IWN7 ESRRAP1-201ENST00000400596 1257 ntBASIC19.41■□□□□ 0.7
RP1L1Q8IWN7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.41■□□□□ 0.7
RP1L1Q8IWN7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RP1L1Q8IWN7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RP1L1Q8IWN7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.4■□□□□ 0.7
RP1L1Q8IWN7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.4■□□□□ 0.7
RP1L1Q8IWN7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RP1L1Q8IWN7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RP1L1Q8IWN7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RP1L1Q8IWN7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RP1L1Q8IWN7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RP1L1Q8IWN7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.4■□□□□ 0.7
RP1L1Q8IWN7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RP1L1Q8IWN7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.39■□□□□ 0.7
RP1L1Q8IWN7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RP1L1Q8IWN7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RP1L1Q8IWN7 AC008550.1-201ENST00000511500 884 ntBASIC19.39■□□□□ 0.69
RP1L1Q8IWN7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RP1L1Q8IWN7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.39■□□□□ 0.69
RP1L1Q8IWN7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RP1L1Q8IWN7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RP1L1Q8IWN7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RP1L1Q8IWN7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RP1L1Q8IWN7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RP1L1Q8IWN7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.39■□□□□ 0.69
RP1L1Q8IWN7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RP1L1Q8IWN7 AC142381.4-202ENST00000563973 229 ntBASIC19.39■□□□□ 0.69
RP1L1Q8IWN7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RP1L1Q8IWN7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.38■□□□□ 0.69
RP1L1Q8IWN7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.38■□□□□ 0.69
RP1L1Q8IWN7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RP1L1Q8IWN7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.38■□□□□ 0.69
RP1L1Q8IWN7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RP1L1Q8IWN7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.38■□□□□ 0.69
RP1L1Q8IWN7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
RP1L1Q8IWN7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RP1L1Q8IWN7 AC098590.1-201ENST00000468126 897 ntBASIC19.38■□□□□ 0.69
RP1L1Q8IWN7 RPS2P52-201ENST00000469610 820 ntBASIC19.38■□□□□ 0.69
RP1L1Q8IWN7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RP1L1Q8IWN7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.38■□□□□ 0.69
RP1L1Q8IWN7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RP1L1Q8IWN7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RP1L1Q8IWN7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RP1L1Q8IWN7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.37■□□□□ 0.69
RP1L1Q8IWN7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RP1L1Q8IWN7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RP1L1Q8IWN7 AC008694.1-202ENST00000636953 945 ntBASIC19.37■□□□□ 0.69
RP1L1Q8IWN7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.37■□□□□ 0.69
RP1L1Q8IWN7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.37■□□□□ 0.69
RP1L1Q8IWN7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.37■□□□□ 0.69
RP1L1Q8IWN7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.37■□□□□ 0.69
RP1L1Q8IWN7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.37■□□□□ 0.69
RP1L1Q8IWN7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.37■□□□□ 0.69
RP1L1Q8IWN7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RP1L1Q8IWN7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RP1L1Q8IWN7 AC092118.2-201ENST00000613495 667 ntBASIC19.37■□□□□ 0.69
RP1L1Q8IWN7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RP1L1Q8IWN7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms