Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 AC104564.3-201ENST00000582367 638 ntBASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRTM1Q86UE6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRTM1Q86UE6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRTM1Q86UE6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
LRRTM1Q86UE6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRTM1Q86UE6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LRRTM1Q86UE6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.58■□□□□ 0.57
LRRTM1Q86UE6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRTM1Q86UE6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRTM1Q86UE6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRTM1Q86UE6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.58■□□□□ 0.56
LRRTM1Q86UE6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRTM1Q86UE6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.58■□□□□ 0.56
LRRTM1Q86UE6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
LRRTM1Q86UE6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRTM1Q86UE6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
LRRTM1Q86UE6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRTM1Q86UE6 OR7E47P-201ENST00000546390 1422 ntBASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 MTDHP2-201ENST00000601468 714 ntBASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRTM1Q86UE6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRTM1Q86UE6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms