Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.98■■□□□ 1.43
RNF180Q86T96 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RNF180Q86T96 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RNF180Q86T96 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF180Q86T96 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RNF180Q86T96 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RNF180Q86T96 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
RNF180Q86T96 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF180Q86T96 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF180Q86T96 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF180Q86T96 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.97■■□□□ 1.43
RNF180Q86T96 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RNF180Q86T96 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.97■■□□□ 1.43
RNF180Q86T96 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF180Q86T96 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
RNF180Q86T96 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.97■■□□□ 1.43
RNF180Q86T96 AL034346.1-201ENST00000568244 1277 ntBASIC23.97■■□□□ 1.43
RNF180Q86T96 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.97■■□□□ 1.43
RNF180Q86T96 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
RNF180Q86T96 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
RNF180Q86T96 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF180Q86T96 LINC01960-201ENST00000563759 1884 ntBASIC23.96■■□□□ 1.43
RNF180Q86T96 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.96■■□□□ 1.43
RNF180Q86T96 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF180Q86T96 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF180Q86T96 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.96■■□□□ 1.43
RNF180Q86T96 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF180Q86T96 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
RNF180Q86T96 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.96■■□□□ 1.43
RNF180Q86T96 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
RNF180Q86T96 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RNF180Q86T96 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.95■■□□□ 1.42
RNF180Q86T96 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF180Q86T96 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF180Q86T96 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.95■■□□□ 1.42
RNF180Q86T96 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF180Q86T96 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF180Q86T96 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.95■■□□□ 1.42
RNF180Q86T96 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RNF180Q86T96 EEF1DP3-203ENST00000566025 782 ntBASIC23.95■■□□□ 1.42
RNF180Q86T96 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.95■■□□□ 1.42
RNF180Q86T96 AC069236.1-201ENST00000604339 616 ntBASIC23.95■■□□□ 1.42
RNF180Q86T96 AC092118.2-201ENST00000613495 667 ntBASIC23.95■■□□□ 1.42
RNF180Q86T96 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RNF180Q86T96 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.95■■□□□ 1.42
RNF180Q86T96 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
RNF180Q86T96 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF180Q86T96 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF180Q86T96 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.95■■□□□ 1.42
RNF180Q86T96 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF180Q86T96 OR7E47P-201ENST00000546390 1422 ntBASIC23.94■■□□□ 1.42
RNF180Q86T96 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF180Q86T96 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF180Q86T96 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.94■■□□□ 1.42
RNF180Q86T96 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RNF180Q86T96 AL512625.2-201ENST00000417533 625 ntBASIC23.94■■□□□ 1.42
RNF180Q86T96 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
RNF180Q86T96 AC053503.5-201ENST00000601508 636 ntBASIC23.94■■□□□ 1.42
RNF180Q86T96 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.94■■□□□ 1.42
RNF180Q86T96 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.94■■□□□ 1.42
RNF180Q86T96 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.94■■□□□ 1.42
RNF180Q86T96 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF180Q86T96 PRORSD1P-201ENST00000295112 541 ntBASIC23.93■■□□□ 1.42
RNF180Q86T96 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF180Q86T96 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RNF180Q86T96 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.93■■□□□ 1.42
RNF180Q86T96 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.93■■□□□ 1.42
RNF180Q86T96 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
RNF180Q86T96 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
RNF180Q86T96 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.92■■□□□ 1.42
RNF180Q86T96 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.92■■□□□ 1.42
RNF180Q86T96 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF180Q86T96 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
RNF180Q86T96 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.92■■□□□ 1.42
RNF180Q86T96 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.92■■□□□ 1.42
RNF180Q86T96 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.92■■□□□ 1.42
RNF180Q86T96 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF180Q86T96 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF180Q86T96 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF180Q86T96 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF180Q86T96 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF180Q86T96 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF180Q86T96 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
RNF180Q86T96 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.91■■□□□ 1.42
RNF180Q86T96 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.91■■□□□ 1.42
RNF180Q86T96 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF180Q86T96 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF180Q86T96 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RNF180Q86T96 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF180Q86T96 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
RNF180Q86T96 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF180Q86T96 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF180Q86T96 AC093787.1-201ENST00000450396 207 ntBASIC23.9■■□□□ 1.42
RNF180Q86T96 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF180Q86T96 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
RNF180Q86T96 AC016405.3-201ENST00000607710 860 ntBASIC23.9■■□□□ 1.42
RNF180Q86T96 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF180Q86T96 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF180Q86T96 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF180Q86T96 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms