Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 MIR3621-201ENST00000580529 85 ntBASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 AC099791.2-201ENST00000605725 427 ntBASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC13.77□□□□□ -0.21
MRPL55Q7Z7F7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL55Q7Z7F7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL55Q7Z7F7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL55Q7Z7F7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL55Q7Z7F7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL55Q7Z7F7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL55Q7Z7F7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL55Q7Z7F7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL55Q7Z7F7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL55Q7Z7F7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC13.76□□□□□ -0.21
MRPL55Q7Z7F7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL55Q7Z7F7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
MRPL55Q7Z7F7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
MRPL55Q7Z7F7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL55Q7Z7F7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 AC006455.2-201ENST00000429931 906 ntBASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
MRPL55Q7Z7F7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL55Q7Z7F7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC13.74□□□□□ -0.21
MRPL55Q7Z7F7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC13.74□□□□□ -0.21
MRPL55Q7Z7F7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC13.74□□□□□ -0.21
MRPL55Q7Z7F7 AC068587.7-201ENST00000641602 218 ntBASIC13.74□□□□□ -0.21
MRPL55Q7Z7F7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL55Q7Z7F7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL55Q7Z7F7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC13.74□□□□□ -0.21
MRPL55Q7Z7F7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL55Q7Z7F7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
MRPL55Q7Z7F7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL55Q7Z7F7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL55Q7Z7F7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
MRPL55Q7Z7F7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL55Q7Z7F7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
MRPL55Q7Z7F7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL55Q7Z7F7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC13.73□□□□□ -0.21
MRPL55Q7Z7F7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC13.73□□□□□ -0.21
MRPL55Q7Z7F7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL55Q7Z7F7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC13.73□□□□□ -0.21
MRPL55Q7Z7F7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
MRPL55Q7Z7F7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL55Q7Z7F7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL55Q7Z7F7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
MRPL55Q7Z7F7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL55Q7Z7F7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
MRPL55Q7Z7F7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
MRPL55Q7Z7F7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL55Q7Z7F7 AC087239.1-201ENST00000622671 572 ntBASIC13.73□□□□□ -0.21
MRPL55Q7Z7F7 AL031602.1-201ENST00000633169 911 ntBASIC13.73□□□□□ -0.21
MRPL55Q7Z7F7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
MRPL55Q7Z7F7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC13.73□□□□□ -0.21
MRPL55Q7Z7F7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL55Q7Z7F7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 MIR3181-201ENST00000578512 73 ntBASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL55Q7Z7F7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms