Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CSMD2Q7Z408 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.34■□□□□ 0.53
CSMD2Q7Z408 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSMD2Q7Z408 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.34■□□□□ 0.53
CSMD2Q7Z408 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.34■□□□□ 0.53
CSMD2Q7Z408 AC004812.2-201ENST00000611079 2094 ntBASIC18.34■□□□□ 0.53
CSMD2Q7Z408 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSMD2Q7Z408 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CSMD2Q7Z408 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSMD2Q7Z408 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSMD2Q7Z408 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.34■□□□□ 0.53
CSMD2Q7Z408 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSMD2Q7Z408 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.33■□□□□ 0.53
CSMD2Q7Z408 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.33■□□□□ 0.53
CSMD2Q7Z408 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSMD2Q7Z408 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.33■□□□□ 0.52
CSMD2Q7Z408 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.33■□□□□ 0.52
CSMD2Q7Z408 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSMD2Q7Z408 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.33■□□□□ 0.52
CSMD2Q7Z408 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CSMD2Q7Z408 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
CSMD2Q7Z408 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.32■□□□□ 0.52
CSMD2Q7Z408 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
CSMD2Q7Z408 BX276092.2-201ENST00000417668 665 ntBASIC18.32■□□□□ 0.52
CSMD2Q7Z408 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.32■□□□□ 0.52
CSMD2Q7Z408 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSMD2Q7Z408 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSMD2Q7Z408 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSMD2Q7Z408 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.32■□□□□ 0.52
CSMD2Q7Z408 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CSMD2Q7Z408 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CSMD2Q7Z408 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSMD2Q7Z408 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSMD2Q7Z408 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CSMD2Q7Z408 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSMD2Q7Z408 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD2Q7Z408 UBE2SP1-201ENST00000450587 669 ntBASIC18.31■□□□□ 0.52
CSMD2Q7Z408 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD2Q7Z408 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.31■□□□□ 0.52
CSMD2Q7Z408 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.31■□□□□ 0.52
CSMD2Q7Z408 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.31■□□□□ 0.52
CSMD2Q7Z408 AC009237.3-201ENST00000393279 1427 ntBASIC18.31■□□□□ 0.52
CSMD2Q7Z408 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CSMD2Q7Z408 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.31■□□□□ 0.52
CSMD2Q7Z408 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD2Q7Z408 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.31■□□□□ 0.52
CSMD2Q7Z408 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD2Q7Z408 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CSMD2Q7Z408 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD2Q7Z408 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD2Q7Z408 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.31■□□□□ 0.52
CSMD2Q7Z408 AC008403.3-201ENST00000598924 454 ntBASIC18.31■□□□□ 0.52
CSMD2Q7Z408 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD2Q7Z408 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD2Q7Z408 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.31■□□□□ 0.52
CSMD2Q7Z408 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSMD2Q7Z408 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSMD2Q7Z408 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.3■□□□□ 0.52
CSMD2Q7Z408 AC055733.4-201ENST00000638462 1354 ntBASIC18.3■□□□□ 0.52
CSMD2Q7Z408 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSMD2Q7Z408 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.3■□□□□ 0.52
CSMD2Q7Z408 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CSMD2Q7Z408 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.3■□□□□ 0.52
CSMD2Q7Z408 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSMD2Q7Z408 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSMD2Q7Z408 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSMD2Q7Z408 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.3■□□□□ 0.52
CSMD2Q7Z408 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.3■□□□□ 0.52
CSMD2Q7Z408 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSMD2Q7Z408 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSMD2Q7Z408 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.3■□□□□ 0.52
CSMD2Q7Z408 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CSMD2Q7Z408 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.3■□□□□ 0.52
CSMD2Q7Z408 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CSMD2Q7Z408 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSMD2Q7Z408 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 SNORA78-201ENST00000459373 127 ntBASIC18.29■□□□□ 0.52
CSMD2Q7Z408 TERF1P5-201ENST00000477545 1207 ntBASIC18.29■□□□□ 0.52
CSMD2Q7Z408 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 DUSP8P3-201ENST00000399571 1760 ntBASIC18.29■□□□□ 0.52
CSMD2Q7Z408 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 MIR718-201ENST00000390190 70 ntBASIC18.29■□□□□ 0.52
CSMD2Q7Z408 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.29■□□□□ 0.52
CSMD2Q7Z408 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.28■□□□□ 0.52
CSMD2Q7Z408 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms