Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCHD4Q6ZW05 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCHD4Q6ZW05 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCHD4Q6ZW05 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.68■□□□□ 0.74
PTCHD4Q6ZW05 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.68■□□□□ 0.74
PTCHD4Q6ZW05 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PTCHD4Q6ZW05 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCHD4Q6ZW05 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PTCHD4Q6ZW05 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.68■□□□□ 0.74
PTCHD4Q6ZW05 AC004687.1-201ENST00000579003 1625 ntBASIC19.68■□□□□ 0.74
PTCHD4Q6ZW05 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.68■□□□□ 0.74
PTCHD4Q6ZW05 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCHD4Q6ZW05 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCHD4Q6ZW05 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PTCHD4Q6ZW05 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCHD4Q6ZW05 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCHD4Q6ZW05 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTCHD4Q6ZW05 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PTCHD4Q6ZW05 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PTCHD4Q6ZW05 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.67■□□□□ 0.74
PTCHD4Q6ZW05 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCHD4Q6ZW05 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.67■□□□□ 0.74
PTCHD4Q6ZW05 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PTCHD4Q6ZW05 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCHD4Q6ZW05 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCHD4Q6ZW05 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PTCHD4Q6ZW05 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCHD4Q6ZW05 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PTCHD4Q6ZW05 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PTCHD4Q6ZW05 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCHD4Q6ZW05 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.66■□□□□ 0.74
PTCHD4Q6ZW05 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.66■□□□□ 0.74
PTCHD4Q6ZW05 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCHD4Q6ZW05 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTCHD4Q6ZW05 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCHD4Q6ZW05 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCHD4Q6ZW05 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.66■□□□□ 0.74
PTCHD4Q6ZW05 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.66■□□□□ 0.74
PTCHD4Q6ZW05 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PTCHD4Q6ZW05 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTCHD4Q6ZW05 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PTCHD4Q6ZW05 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 AF106564.1-201ENST00000607058 2553 ntBASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.65■□□□□ 0.74
PTCHD4Q6ZW05 FEM1AP4-201ENST00000443167 1987 ntBASIC19.64■□□□□ 0.74
PTCHD4Q6ZW05 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
PTCHD4Q6ZW05 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.64■□□□□ 0.74
PTCHD4Q6ZW05 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PTCHD4Q6ZW05 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.64■□□□□ 0.74
PTCHD4Q6ZW05 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTCHD4Q6ZW05 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.64■□□□□ 0.73
PTCHD4Q6ZW05 MIR6724-1-201ENST00000616420 92 ntBASIC19.64■□□□□ 0.73
PTCHD4Q6ZW05 MIR6724-2-201ENST00000616483 92 ntBASIC19.64■□□□□ 0.73
PTCHD4Q6ZW05 MIR6724-4-201ENST00000617390 92 ntBASIC19.64■□□□□ 0.73
PTCHD4Q6ZW05 MIR6724-3-201ENST00000622482 92 ntBASIC19.64■□□□□ 0.73
PTCHD4Q6ZW05 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTCHD4Q6ZW05 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTCHD4Q6ZW05 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTCHD4Q6ZW05 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.64■□□□□ 0.73
PTCHD4Q6ZW05 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTCHD4Q6ZW05 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.64■□□□□ 0.73
PTCHD4Q6ZW05 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PTCHD4Q6ZW05 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTCHD4Q6ZW05 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCHD4Q6ZW05 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTCHD4Q6ZW05 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCHD4Q6ZW05 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTCHD4Q6ZW05 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCHD4Q6ZW05 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTCHD4Q6ZW05 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.63■□□□□ 0.73
PTCHD4Q6ZW05 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCHD4Q6ZW05 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCHD4Q6ZW05 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.63■□□□□ 0.73
PTCHD4Q6ZW05 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTCHD4Q6ZW05 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTCHD4Q6ZW05 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTCHD4Q6ZW05 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTCHD4Q6ZW05 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.62■□□□□ 0.73
PTCHD4Q6ZW05 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PTCHD4Q6ZW05 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.62■□□□□ 0.73
PTCHD4Q6ZW05 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.62■□□□□ 0.73
PTCHD4Q6ZW05 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.62■□□□□ 0.73
PTCHD4Q6ZW05 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
PTCHD4Q6ZW05 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms