Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CDH17Q12864 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDH17Q12864 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
CDH17Q12864 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH17Q12864 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDH17Q12864 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDH17Q12864 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.7■■□□□ 1.06
CDH17Q12864 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CDH17Q12864 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CDH17Q12864 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH17Q12864 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.7■■□□□ 1.06
CDH17Q12864 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH17Q12864 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
CDH17Q12864 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.69■■□□□ 1.06
CDH17Q12864 AC026471.6-201ENST00000622954 1905 ntBASIC21.69■■□□□ 1.06
CDH17Q12864 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH17Q12864 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH17Q12864 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.69■■□□□ 1.06
CDH17Q12864 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.69■■□□□ 1.06
CDH17Q12864 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH17Q12864 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.69■■□□□ 1.06
CDH17Q12864 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.69■■□□□ 1.06
CDH17Q12864 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH17Q12864 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH17Q12864 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CDH17Q12864 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH17Q12864 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH17Q12864 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH17Q12864 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH17Q12864 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH17Q12864 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CDH17Q12864 PBX2P1-201ENST00000493219 1291 ntBASIC21.68■■□□□ 1.06
CDH17Q12864 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH17Q12864 AC133561.4-201ENST00000566112 224 ntBASIC21.68■■□□□ 1.06
CDH17Q12864 AC126544.1-201ENST00000580842 1059 ntBASIC21.68■■□□□ 1.06
CDH17Q12864 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH17Q12864 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.68■■□□□ 1.06
CDH17Q12864 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH17Q12864 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH17Q12864 AP004607.7-201ENST00000527152 1677 ntBASIC21.68■■□□□ 1.06
CDH17Q12864 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH17Q12864 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH17Q12864 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.68■■□□□ 1.06
CDH17Q12864 PKD1P6-201ENST00000343738 4769 ntBASIC21.67■■□□□ 1.06
CDH17Q12864 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
CDH17Q12864 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CDH17Q12864 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH17Q12864 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDH17Q12864 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH17Q12864 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.67■■□□□ 1.06
CDH17Q12864 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CDH17Q12864 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.67■■□□□ 1.06
CDH17Q12864 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.67■■□□□ 1.06
CDH17Q12864 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CDH17Q12864 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDH17Q12864 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDH17Q12864 AC106739.1-201ENST00000617035 715 ntBASIC21.67■■□□□ 1.06
CDH17Q12864 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH17Q12864 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.67■■□□□ 1.06
CDH17Q12864 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.67■■□□□ 1.06
CDH17Q12864 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH17Q12864 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH17Q12864 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH17Q12864 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH17Q12864 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CDH17Q12864 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.66■■□□□ 1.06
CDH17Q12864 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
CDH17Q12864 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH17Q12864 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CDH17Q12864 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH17Q12864 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH17Q12864 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.66■■□□□ 1.06
CDH17Q12864 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH17Q12864 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH17Q12864 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.66■■□□□ 1.06
CDH17Q12864 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CDH17Q12864 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.66■■□□□ 1.06
CDH17Q12864 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.66■■□□□ 1.06
CDH17Q12864 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH17Q12864 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH17Q12864 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH17Q12864 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CDH17Q12864 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.65■■□□□ 1.06
CDH17Q12864 IGHV3-19-201ENST00000521488 291 ntBASIC21.65■■□□□ 1.06
CDH17Q12864 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CDH17Q12864 AC008764.7-201ENST00000593779 1081 ntBASIC21.65■■□□□ 1.06
CDH17Q12864 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.65■■□□□ 1.06
CDH17Q12864 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH17Q12864 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH17Q12864 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH17Q12864 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH17Q12864 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.65■■□□□ 1.06
CDH17Q12864 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH17Q12864 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.64■■□□□ 1.06
CDH17Q12864 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH17Q12864 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH17Q12864 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.64■■□□□ 1.05
CDH17Q12864 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH17Q12864 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH17Q12864 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms