Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 RPN2YIL075C 2838 nt3.35□□□□□ -1.87
DDC1Q08949 THR4YCR053W 1545 nt3.35□□□□□ -1.87
DDC1Q08949 SMI1YGR229C 1518 nt3.35□□□□□ -1.87
DDC1Q08949 tF(GAA)DtF(GAA)D 73 nt3.35□□□□□ -1.87
DDC1Q08949 tF(GAA)NtF(GAA)N 73 nt3.35□□□□□ -1.87
DDC1Q08949 YGL214WYGL214W 486 nt3.35□□□□□ -1.87
DDC1Q08949 YAL004WYAL004W 648 nt3.35□□□□□ -1.87
DDC1Q08949 ANB1YJR047C 474 nt3.35□□□□□ -1.87
DDC1Q08949 YLL047WYLL047W 384 nt3.35□□□□□ -1.87
DDC1Q08949 YVC1YOR087W 2028 nt3.35□□□□□ -1.87
DDC1Q08949 TRE2YOR256C 2430 nt3.35□□□□□ -1.87
DDC1Q08949 RRP8YDR083W 1179 nt3.34□□□□□ -1.87
DDC1Q08949 YGL258W-AYGL258W-A 234 nt3.34□□□□□ -1.87
DDC1Q08949 YHR180WYHR180W 492 nt3.34□□□□□ -1.87
DDC1Q08949 RPC34YNR003C 954 nt3.34□□□□□ -1.87
DDC1Q08949 MGA1YGR249W 1371 nt3.34□□□□□ -1.88
DDC1Q08949 UBP12YJL197W 3765 nt3.34□□□□□ -1.88
DDC1Q08949 NOP4YPL043W 2058 nt3.34□□□□□ -1.88
DDC1Q08949 STU2YLR045C 2667 nt3.34□□□□□ -1.88
DDC1Q08949 SQS1YNL224C 2304 nt3.33□□□□□ -1.88
DDC1Q08949 HAP4YKL109W 1665 nt3.33□□□□□ -1.88
DDC1Q08949 AUS1YOR011W 4185 nt3.33□□□□□ -1.88
DDC1Q08949 RAD5YLR032W 3510 nt3.33□□□□□ -1.88
DDC1Q08949 RPS18AYDR450W 441 nt3.33□□□□□ -1.88
DDC1Q08949 YER039C-AYER039C-A 219 nt3.33□□□□□ -1.88
DDC1Q08949 YFL065CYFL065C 309 nt3.33□□□□□ -1.88
DDC1Q08949 KEG1YFR042W 603 nt3.33□□□□□ -1.88
DDC1Q08949 TEX1YNL253W 1269 nt3.33□□□□□ -1.88
DDC1Q08949 PST1YDR055W 1335 nt3.33□□□□□ -1.88
DDC1Q08949 PKH1YDR490C 2301 nt3.32□□□□□ -1.88
DDC1Q08949 SET1YHR119W 3243 nt3.32□□□□□ -1.88
DDC1Q08949 YCR015CYCR015C 954 nt3.32□□□□□ -1.88
DDC1Q08949 YOS1YER074W-A 258 nt3.32□□□□□ -1.88
DDC1Q08949 CDC26YFR036W 375 nt3.32□□□□□ -1.88
DDC1Q08949 YIR040CYIR040C 333 nt3.32□□□□□ -1.88
DDC1Q08949 YJL175WYJL175W 513 nt3.32□□□□□ -1.88
DDC1Q08949 EBP2YKL172W 1284 nt3.32□□□□□ -1.88
DDC1Q08949 MRPL16YBL038W 699 nt3.32□□□□□ -1.88
DDC1Q08949 YMR178WYMR178W 825 nt3.32□□□□□ -1.88
DDC1Q08949 MDJ2YNL328C 441 nt3.32□□□□□ -1.88
DDC1Q08949 YBL096CYBL096C 309 nt3.32□□□□□ -1.88
DDC1Q08949 KTR6YPL053C 1341 nt3.32□□□□□ -1.88
DDC1Q08949 IPI3YNL182C 1668 nt3.32□□□□□ -1.88
DDC1Q08949 ARG5,6YER069W 2592 nt3.32□□□□□ -1.88
DDC1Q08949 YHR080CYHR080C 4038 nt3.31□□□□□ -1.88
DDC1Q08949 ERG9YHR190W 1335 nt3.31□□□□□ -1.88
DDC1Q08949 QRI7YDL104C 1224 nt3.31□□□□□ -1.88
DDC1Q08949 PCL2YDL127W 927 nt3.31□□□□□ -1.88
DDC1Q08949 CAB2YIL083C 1098 nt3.31□□□□□ -1.88
DDC1Q08949 SSO2YMR183C 888 nt3.31□□□□□ -1.88
DDC1Q08949 YNL162W-AYNL162W-A 219 nt3.31□□□□□ -1.88
DDC1Q08949 VAM10YOR068C 345 nt3.31□□□□□ -1.88
DDC1Q08949 YBR053CYBR053C 1077 nt3.31□□□□□ -1.88
DDC1Q08949 TIM12YBR091C 330 nt3.31□□□□□ -1.88
DDC1Q08949 YBR238CYBR238C 2196 nt3.3□□□□□ -1.88
DDC1Q08949 CIN8YEL061C 3003 nt3.3□□□□□ -1.88
DDC1Q08949 FAP7YDL166C 594 nt3.3□□□□□ -1.88
DDC1Q08949 YDL186WYDL186W 834 nt3.3□□□□□ -1.88
DDC1Q08949 ECO1YFR027W 846 nt3.3□□□□□ -1.88
DDC1Q08949 PAN5YHR063C 1140 nt3.3□□□□□ -1.88
DDC1Q08949 IMP3YHR148W 552 nt3.3□□□□□ -1.88
DDC1Q08949 LAC1YKL008C 1257 nt3.3□□□□□ -1.88
DDC1Q08949 APC9YLR102C 798 nt3.3□□□□□ -1.88
DDC1Q08949 PSY3YLR376C 729 nt3.3□□□□□ -1.88
DDC1Q08949 YLR444CYLR444C 303 nt3.3□□□□□ -1.88
DDC1Q08949 HSH49YOR319W 642 nt3.3□□□□□ -1.88
DDC1Q08949 MUM2YBR057C 1101 nt3.3□□□□□ -1.88
DDC1Q08949 EPO1YMR124W 2832 nt3.3□□□□□ -1.88
DDC1Q08949 BAR1YIL015W 1764 nt3.3□□□□□ -1.88
DDC1Q08949 PFK26YIL107C 2484 nt3.3□□□□□ -1.88
DDC1Q08949 DSN1YIR010W 1731 nt3.3□□□□□ -1.88
DDC1Q08949 CIT1YNR001C 1440 nt3.29□□□□□ -1.88
DDC1Q08949 TPD3YAL016W 1908 nt3.29□□□□□ -1.88
DDC1Q08949 RRP5YMR229C 5190 nt3.29□□□□□ -1.88
DDC1Q08949 RTT109YLL002W 1311 nt3.29□□□□□ -1.88
DDC1Q08949 YPR022CYPR022C 3402 nt3.29□□□□□ -1.88
DDC1Q08949 YDL032WYDL032W 312 nt3.29□□□□□ -1.88
DDC1Q08949 YDR336WYDR336W 945 nt3.29□□□□□ -1.88
DDC1Q08949 MAK16YAL025C 921 nt3.29□□□□□ -1.88
DDC1Q08949 RPS28BYLR264W 204 nt3.29□□□□□ -1.88
DDC1Q08949 YOL166CYOL166C 339 nt3.29□□□□□ -1.88
DDC1Q08949 DDP1YOR163W 567 nt3.29□□□□□ -1.88
DDC1Q08949 YCL001W-AYCL001W-A 462 nt3.29□□□□□ -1.88
DDC1Q08949 VPS30YPL120W 1674 nt3.29□□□□□ -1.88
DDC1Q08949 ISW2YOR304W 3363 nt3.29□□□□□ -1.88
DDC1Q08949 SEC6YIL068C 2418 nt3.29□□□□□ -1.88
DDC1Q08949 NRP1YDL167C 2160 nt3.28□□□□□ -1.88
DDC1Q08949 TCP1YDR212W 1680 nt3.28□□□□□ -1.88
DDC1Q08949 ERG2YMR202W 669 nt3.28□□□□□ -1.88
DDC1Q08949 YMR316C-AYMR316C-A 312 nt3.28□□□□□ -1.88
DDC1Q08949 SIL1YOL031C 1266 nt3.28□□□□□ -1.88
DDC1Q08949 YPR142CYPR142C 564 nt3.28□□□□□ -1.88
DDC1Q08949 DSL1YNL258C 2265 nt3.28□□□□□ -1.88
DDC1Q08949 SSM4YIL030C 3960 nt3.28□□□□□ -1.88
DDC1Q08949 FUN12YAL035W 3009 nt3.27□□□□□ -1.89
DDC1Q08949 DNM1YLL001W 2274 nt3.27□□□□□ -1.89
DDC1Q08949 YMR317WYMR317W 3423 nt3.27□□□□□ -1.89
DDC1Q08949 YLR352WYLR352W 2424 nt3.27□□□□□ -1.89
DDC1Q08949 snR78snR78 87 nt3.27□□□□□ -1.89
DDC1Q08949 YDL176WYDL176W 2127 nt3.27□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 46.2 ms