Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 BSC2YDR275W 708 nt5.11□□□□□ -1.59
UBP3Q01477 NKP1YDR383C 717 nt5.11□□□□□ -1.59 RIP-Chip
UBP3Q01477 NSA2YER126C 786 nt5.11□□□□□ -1.59
UBP3Q01477 ECM34YHL043W 513 nt5.11□□□□□ -1.59
UBP3Q01477 tX(XXX)DtX(XXX)D 100 nt5.11□□□□□ -1.59
UBP3Q01477 YNL122CYNL122C 348 nt5.11□□□□□ -1.59
UBP3Q01477 ALG14YBR070C 714 nt5.11□□□□□ -1.59
UBP3Q01477 ERV15YBR210W 429 nt5.11□□□□□ -1.59
UBP3Q01477 PAL1YDR348C 1500 nt5.11□□□□□ -1.59 RIP-Chip
UBP3Q01477 SST2YLR452C 2097 nt5.11□□□□□ -1.59 RIP-Chip
UBP3Q01477 DIG2YDR480W 972 nt5.1□□□□□ -1.59
UBP3Q01477 YEL030C-AYEL030C-A 315 nt5.1□□□□□ -1.59
UBP3Q01477 VPS29YHR012W 849 nt5.1□□□□□ -1.59
UBP3Q01477 MET14YKL001C 609 nt5.1□□□□□ -1.59
UBP3Q01477 AEP2YMR282C 1743 nt5.1□□□□□ -1.59
UBP3Q01477 YBL071CYBL071C 309 nt5.1□□□□□ -1.59
UBP3Q01477 BRX1YOL077C 876 nt5.1□□□□□ -1.59 RIP-Chip
UBP3Q01477 HPA2YPR193C 471 nt5.1□□□□□ -1.59 RIP-Chip
UBP3Q01477 TMA64YDR117C 1698 nt5.09□□□□□ -1.59
UBP3Q01477 IZH1YDR492W 951 nt5.09□□□□□ -1.59
UBP3Q01477 JAC1YGL018C 555 nt5.09□□□□□ -1.59
UBP3Q01477 YAR019W-AYAR019W-A 333 nt5.09□□□□□ -1.59
UBP3Q01477 YNR042WYNR042W 429 nt5.09□□□□□ -1.59
UBP3Q01477 YJL206CYJL206C 2277 nt5.09□□□□□ -1.59 RIP-Chip
UBP3Q01477 YER077CYER077C 2067 nt5.09□□□□□ -1.59
UBP3Q01477 PCA1YBR295W 3651 nt5.09□□□□□ -1.6 RIP-Chip
UBP3Q01477 DSL1YNL258C 2265 nt5.08□□□□□ -1.6
UBP3Q01477 GSY1YFR015C 2127 nt5.08□□□□□ -1.6
UBP3Q01477 RVB1YDR190C 1392 nt5.08□□□□□ -1.6 RIP-Chip
UBP3Q01477 TRM82YDR165W 1335 nt5.08□□□□□ -1.6
UBP3Q01477 YDR018CYDR018C 1191 nt5.08□□□□□ -1.6
UBP3Q01477 PEX10YDR265W 1014 nt5.08□□□□□ -1.6
UBP3Q01477 YEL067CYEL067C 588 nt5.08□□□□□ -1.6
UBP3Q01477 RPL34AYER056C-A 366 nt5.08□□□□□ -1.6 RIP-Chip
UBP3Q01477 CAP2YIL034C 864 nt5.08□□□□□ -1.6
UBP3Q01477 YJR128WYJR128W 360 nt5.08□□□□□ -1.6
UBP3Q01477 UTP23YOR004W 765 nt5.08□□□□□ -1.6
UBP3Q01477 CDC21YOR074C 915 nt5.08□□□□□ -1.6
UBP3Q01477 NIP7YPL211W 546 nt5.08□□□□□ -1.6
UBP3Q01477 snR17bsnR17b 332 nt5.08□□□□□ -1.6
UBP3Q01477 YBR096WYBR096W 693 nt5.08□□□□□ -1.6
UBP3Q01477 YOR365CYOR365C 2112 nt5.08□□□□□ -1.6
UBP3Q01477 SUP35YDR172W 2058 nt5.08□□□□□ -1.6
UBP3Q01477 UBX5YDR330W 1503 nt5.07□□□□□ -1.6
UBP3Q01477 VPS27YNR006W 1869 nt5.07□□□□□ -1.6
UBP3Q01477 MFB1YDR219C 1398 nt5.07□□□□□ -1.6
UBP3Q01477 ADP1YCR011C 3150 nt5.07□□□□□ -1.6
UBP3Q01477 GCD1YOR260W 1737 nt5.07□□□□□ -1.6
UBP3Q01477 HMO1YDR174W 741 nt5.07□□□□□ -1.6
UBP3Q01477 GUK1YDR454C 564 nt5.07□□□□□ -1.6
UBP3Q01477 YGR045CYGR045C 363 nt5.07□□□□□ -1.6
UBP3Q01477 YIL156W-AYIL156W-A 402 nt5.07□□□□□ -1.6
UBP3Q01477 GPX1YKL026C 504 nt5.07□□□□□ -1.6
UBP3Q01477 APS1YLR170C 471 nt5.07□□□□□ -1.6
UBP3Q01477 YSF3YNL138W-A 258 nt5.07□□□□□ -1.6
UBP3Q01477 RPS11BYBR048W 471 nt5.07□□□□□ -1.6
UBP3Q01477 MAK3YPR051W 531 nt5.07□□□□□ -1.6
UBP3Q01477 OM14YBR230C 405 nt5.07□□□□□ -1.6
UBP3Q01477 AI4Q0065 1671 nt5.07□□□□□ -1.6
UBP3Q01477 HOM3YER052C 1584 nt5.07□□□□□ -1.6
UBP3Q01477 DUN1YDL101C 1542 nt5.07□□□□□ -1.6
UBP3Q01477 RRP3YHR065C 1506 nt5.07□□□□□ -1.6
UBP3Q01477 CTM1YHR109W 1758 nt5.06□□□□□ -1.6
UBP3Q01477 TPS3YMR261C 3165 nt5.06□□□□□ -1.6
UBP3Q01477 YDR131CYDR131C 1671 nt5.06□□□□□ -1.6
UBP3Q01477 ROK1YGL171W 1695 nt5.06□□□□□ -1.6
UBP3Q01477 MSE1YOL033W 1611 nt5.06□□□□□ -1.6 RIP-Chip
UBP3Q01477 DPB4YDR121W 591 nt5.06□□□□□ -1.6 RIP-Chip
UBP3Q01477 AUA1YFL010W-A 285 nt5.06□□□□□ -1.6
UBP3Q01477 YVH1YIR026C 1095 nt5.06□□□□□ -1.6
UBP3Q01477 YAL034C-BYAL034C-B 354 nt5.06□□□□□ -1.6
UBP3Q01477 YKL131WYKL131W 522 nt5.06□□□□□ -1.6
UBP3Q01477 FYV7YLR068W 456 nt5.06□□□□□ -1.6
UBP3Q01477 ECM15YBL001C 315 nt5.06□□□□□ -1.6
UBP3Q01477 PRM6YML047C 1059 nt5.06□□□□□ -1.6
UBP3Q01477 YML053CYML053C 639 nt5.06□□□□□ -1.6
UBP3Q01477 YNL058CYNL058C 951 nt5.06□□□□□ -1.6
UBP3Q01477 MGR2YPL098C 342 nt5.06□□□□□ -1.6
UBP3Q01477 KAR4YCL055W 1008 nt5.06□□□□□ -1.6
UBP3Q01477 SDS23YGL056C 1584 nt5.06□□□□□ -1.6
UBP3Q01477 EMP47YFL048C 1338 nt5.05□□□□□ -1.6
UBP3Q01477 IMD2YHR216W 1572 nt5.05□□□□□ -1.6
UBP3Q01477 TMA20YER007C-A 546 nt5.05□□□□□ -1.6
UBP3Q01477 MAM1YER106W 909 nt5.05□□□□□ -1.6
UBP3Q01477 YER165C-AYER165C-A 357 nt5.05□□□□□ -1.6
UBP3Q01477 BRR6YGL247W 594 nt5.05□□□□□ -1.6 RIP-Chip
UBP3Q01477 CDC12YHR107C 1224 nt5.05□□□□□ -1.6
UBP3Q01477 SNX4YJL036W 1272 nt5.05□□□□□ -1.6 RIP-Chip
UBP3Q01477 ATG33YLR356W 594 nt5.05□□□□□ -1.6
UBP3Q01477 YBL006W-AYBL006W-A 150 nt5.05□□□□□ -1.6
UBP3Q01477 YPR169W-AYPR169W-A 219 nt5.05□□□□□ -1.6
UBP3Q01477 YPR170W-BYPR170W-B 258 nt5.05□□□□□ -1.6
UBP3Q01477 ARC40YBR234C 1155 nt5.05□□□□□ -1.6
UBP3Q01477 MDM30YLR368W 1797 nt5.05□□□□□ -1.6
UBP3Q01477 KAR2YJL034W 2049 nt5.05□□□□□ -1.6
UBP3Q01477 AGE1YDR524C 1449 nt5.05□□□□□ -1.6
UBP3Q01477 PDR15YDR406W 4590 nt5.04□□□□□ -1.6
UBP3Q01477 ORC4YPR162C 1590 nt5.04□□□□□ -1.6
UBP3Q01477 VMA21YGR105W 234 nt5.04□□□□□ -1.6
UBP3Q01477 YHL049CYHL049C 816 nt5.04□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 31.1 ms