Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VBP1P61758 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VBP1P61758 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VBP1P61758 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VBP1P61758 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VBP1P61758 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
VBP1P61758 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VBP1P61758 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.23■□□□□ 0.67
VBP1P61758 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
VBP1P61758 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VBP1P61758 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.23■□□□□ 0.67
VBP1P61758 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
VBP1P61758 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VBP1P61758 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VBP1P61758 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.23■□□□□ 0.67
VBP1P61758 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VBP1P61758 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.23■□□□□ 0.67
VBP1P61758 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
VBP1P61758 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VBP1P61758 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.23■□□□□ 0.67
VBP1P61758 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
VBP1P61758 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.23■□□□□ 0.67
VBP1P61758 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VBP1P61758 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VBP1P61758 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VBP1P61758 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
VBP1P61758 AC087289.5-201ENST00000586076 3175 ntBASIC19.22■□□□□ 0.67
VBP1P61758 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VBP1P61758 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.22■□□□□ 0.67
VBP1P61758 AC011551.1-201ENST00000614101 683 ntBASIC19.22■□□□□ 0.67
VBP1P61758 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.22■□□□□ 0.67
VBP1P61758 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
VBP1P61758 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.22■□□□□ 0.67
VBP1P61758 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
VBP1P61758 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
VBP1P61758 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VBP1P61758 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VBP1P61758 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VBP1P61758 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.21■□□□□ 0.67
VBP1P61758 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
VBP1P61758 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VBP1P61758 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VBP1P61758 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VBP1P61758 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.21■□□□□ 0.67
VBP1P61758 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
VBP1P61758 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
VBP1P61758 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
VBP1P61758 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.21■□□□□ 0.67
VBP1P61758 AC022413.1-201ENST00000624602 984 ntBASIC19.21■□□□□ 0.67
VBP1P61758 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VBP1P61758 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VBP1P61758 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VBP1P61758 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VBP1P61758 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VBP1P61758 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.2■□□□□ 0.66
VBP1P61758 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.2■□□□□ 0.66
VBP1P61758 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VBP1P61758 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
VBP1P61758 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VBP1P61758 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.2■□□□□ 0.66
VBP1P61758 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
VBP1P61758 AC087393.1-201ENST00000582896 145 ntBASIC19.2■□□□□ 0.66
VBP1P61758 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.2■□□□□ 0.66
VBP1P61758 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.2■□□□□ 0.66
VBP1P61758 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
VBP1P61758 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VBP1P61758 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VBP1P61758 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VBP1P61758 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VBP1P61758 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.19■□□□□ 0.66
VBP1P61758 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
VBP1P61758 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VBP1P61758 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VBP1P61758 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.19■□□□□ 0.66
VBP1P61758 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VBP1P61758 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
VBP1P61758 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VBP1P61758 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VBP1P61758 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VBP1P61758 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VBP1P61758 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VBP1P61758 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.18■□□□□ 0.66
VBP1P61758 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VBP1P61758 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VBP1P61758 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
VBP1P61758 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VBP1P61758 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.18■□□□□ 0.66
VBP1P61758 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
VBP1P61758 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.18■□□□□ 0.66
VBP1P61758 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.18■□□□□ 0.66
VBP1P61758 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VBP1P61758 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VBP1P61758 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
VBP1P61758 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VBP1P61758 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VBP1P61758 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VBP1P61758 AL020996.1-203ENST00000536896 2307 ntBASIC19.17■□□□□ 0.66
VBP1P61758 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VBP1P61758 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VBP1P61758 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms