Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN2P57739 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CLDN2P57739 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN2P57739 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN2P57739 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN2P57739 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN2P57739 CROCCP5-201ENST00000436658 830 ntBASIC21.25■□□□□ 0.99
CLDN2P57739 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.25■□□□□ 0.99
CLDN2P57739 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.25■□□□□ 0.99
CLDN2P57739 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.25■□□□□ 0.99
CLDN2P57739 MFSD11-216ENST00000590393 1141 ntBASIC21.25■□□□□ 0.99
CLDN2P57739 AP001160.3-201ENST00000601484 763 ntBASIC21.25■□□□□ 0.99
CLDN2P57739 UBE2DNL-204ENST00000602536 740 ntBASIC21.25■□□□□ 0.99
CLDN2P57739 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.25■□□□□ 0.99
CLDN2P57739 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.25■□□□□ 0.99
CLDN2P57739 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN2P57739 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.25■□□□□ 0.99
CLDN2P57739 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN2P57739 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN2P57739 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.24■□□□□ 0.99
CLDN2P57739 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN2P57739 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN2P57739 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.24■□□□□ 0.99
CLDN2P57739 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.24■□□□□ 0.99
CLDN2P57739 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN2P57739 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.24■□□□□ 0.99
CLDN2P57739 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.24■□□□□ 0.99
CLDN2P57739 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.24■□□□□ 0.99
CLDN2P57739 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN2P57739 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN2P57739 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
CLDN2P57739 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN2P57739 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN2P57739 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CLDN2P57739 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.23■□□□□ 0.99
CLDN2P57739 AC006970.2-201ENST00000450065 779 ntBASIC21.23■□□□□ 0.99
CLDN2P57739 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CLDN2P57739 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.23■□□□□ 0.99
CLDN2P57739 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.23■□□□□ 0.99
CLDN2P57739 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN2P57739 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.23■□□□□ 0.99
CLDN2P57739 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.23■□□□□ 0.99
CLDN2P57739 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN2P57739 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.23■□□□□ 0.99
CLDN2P57739 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN2P57739 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.23■□□□□ 0.99
CLDN2P57739 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN2P57739 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN2P57739 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN2P57739 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN2P57739 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN2P57739 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN2P57739 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN2P57739 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.22■□□□□ 0.99
CLDN2P57739 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN2P57739 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN2P57739 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN2P57739 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.22■□□□□ 0.99
CLDN2P57739 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.22■□□□□ 0.99
CLDN2P57739 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.22■□□□□ 0.99
CLDN2P57739 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.22■□□□□ 0.99
CLDN2P57739 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN2P57739 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN2P57739 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN2P57739 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.21■□□□□ 0.99
CLDN2P57739 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN2P57739 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.21■□□□□ 0.99
CLDN2P57739 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.21■□□□□ 0.99
CLDN2P57739 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN2P57739 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CLDN2P57739 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.21■□□□□ 0.99
CLDN2P57739 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CLDN2P57739 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.21■□□□□ 0.99
CLDN2P57739 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.21■□□□□ 0.99
CLDN2P57739 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.21■□□□□ 0.99
CLDN2P57739 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.21■□□□□ 0.99
CLDN2P57739 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CLDN2P57739 AL034346.1-201ENST00000568244 1277 ntBASIC21.21■□□□□ 0.99
CLDN2P57739 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.21■□□□□ 0.99
CLDN2P57739 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN2P57739 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN2P57739 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.2■□□□□ 0.98
CLDN2P57739 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CLDN2P57739 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN2P57739 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN2P57739 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN2P57739 MIR663A-201ENST00000385250 93 ntBASIC21.2■□□□□ 0.98
CLDN2P57739 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.2■□□□□ 0.98
CLDN2P57739 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN2P57739 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.2■□□□□ 0.98
CLDN2P57739 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.2■□□□□ 0.98
CLDN2P57739 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.2■□□□□ 0.98
CLDN2P57739 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN2P57739 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CLDN2P57739 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN2P57739 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN2P57739 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN2P57739 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN2P57739 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.2■□□□□ 0.98
CLDN2P57739 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms