Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC28.22■■■□□ 2.11
RIPK4P57078 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
RIPK4P57078 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC28.22■■■□□ 2.11
RIPK4P57078 AL034346.1-201ENST00000568244 1277 ntBASIC28.22■■■□□ 2.11
RIPK4P57078 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
RIPK4P57078 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
RIPK4P57078 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RIPK4P57078 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RIPK4P57078 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RIPK4P57078 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC28.21■■■□□ 2.11
RIPK4P57078 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RIPK4P57078 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RIPK4P57078 KRT18P61-201ENST00000585825 1298 ntBASIC28.21■■■□□ 2.11
RIPK4P57078 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
RIPK4P57078 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC28.21■■■□□ 2.11
RIPK4P57078 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RIPK4P57078 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC28.21■■■□□ 2.11
RIPK4P57078 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RIPK4P57078 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RIPK4P57078 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC28.2■■■□□ 2.11
RIPK4P57078 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
RIPK4P57078 AC092053.2-201ENST00000640557 1818 ntBASIC28.2■■■□□ 2.11
RIPK4P57078 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
RIPK4P57078 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
RIPK4P57078 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
RIPK4P57078 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RIPK4P57078 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC28.2■■■□□ 2.1
RIPK4P57078 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC28.2■■■□□ 2.1
RIPK4P57078 NTF6G-201ENST00000591094 616 ntBASIC28.2■■■□□ 2.1
RIPK4P57078 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
RIPK4P57078 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC28.2■■■□□ 2.1
RIPK4P57078 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC28.2■■■□□ 2.1
RIPK4P57078 AC242852.2-201ENST00000615738 1807 ntBASIC28.2■■■□□ 2.1
RIPK4P57078 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC28.19■■■□□ 2.1
RIPK4P57078 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC28.19■■■□□ 2.1
RIPK4P57078 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RIPK4P57078 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC28.19■■■□□ 2.1
RIPK4P57078 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC28.19■■■□□ 2.1
RIPK4P57078 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC28.19■■■□□ 2.1
RIPK4P57078 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC28.19■■■□□ 2.1
RIPK4P57078 AC012676.1-201ENST00000574705 1949 ntBASIC28.19■■■□□ 2.1
RIPK4P57078 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RIPK4P57078 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC28.19■■■□□ 2.1
RIPK4P57078 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC28.19■■■□□ 2.1
RIPK4P57078 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RIPK4P57078 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RIPK4P57078 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC28.18■■■□□ 2.1
RIPK4P57078 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC28.18■■■□□ 2.1
RIPK4P57078 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC28.18■■■□□ 2.1
RIPK4P57078 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC28.18■■■□□ 2.1
RIPK4P57078 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC28.18■■■□□ 2.1
RIPK4P57078 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
RIPK4P57078 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC28.17■■■□□ 2.1
RIPK4P57078 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
RIPK4P57078 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
RIPK4P57078 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RIPK4P57078 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RIPK4P57078 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
RIPK4P57078 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC28.17■■■□□ 2.1
RIPK4P57078 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RIPK4P57078 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
RIPK4P57078 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RIPK4P57078 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC28.17■■■□□ 2.1
RIPK4P57078 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC28.17■■■□□ 2.1
RIPK4P57078 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC28.17■■■□□ 2.1
RIPK4P57078 AP006587.3-201ENST00000525742 1516 ntBASIC28.17■■■□□ 2.1
RIPK4P57078 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC28.17■■■□□ 2.1
RIPK4P57078 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RIPK4P57078 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
RIPK4P57078 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
RIPK4P57078 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RIPK4P57078 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
RIPK4P57078 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
RIPK4P57078 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RIPK4P57078 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC28.16■■■□□ 2.1
RIPK4P57078 AC079140.4-201ENST00000507448 529 ntBASIC28.16■■■□□ 2.1
RIPK4P57078 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RIPK4P57078 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RIPK4P57078 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RIPK4P57078 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RIPK4P57078 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC28.15■■■□□ 2.1
RIPK4P57078 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RIPK4P57078 AP004607.4-201ENST00000530158 1459 ntBASIC28.15■■■□□ 2.1
RIPK4P57078 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC28.15■■■□□ 2.1
RIPK4P57078 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RIPK4P57078 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RIPK4P57078 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC28.15■■■□□ 2.1
RIPK4P57078 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RIPK4P57078 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
RIPK4P57078 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RIPK4P57078 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RIPK4P57078 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
RIPK4P57078 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
RIPK4P57078 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
RIPK4P57078 COX20-201ENST00000366528 568 ntTSL 2 BASIC28.14■■■□□ 2.1
RIPK4P57078 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
RIPK4P57078 PARL-206ENST00000435888 1098 ntTSL 5 BASIC28.14■■■□□ 2.1
RIPK4P57078 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC28.14■■■□□ 2.1
RIPK4P57078 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
RIPK4P57078 AC004854.2-201ENST00000608450 1441 ntBASIC28.14■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms