Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN12P56749 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CLDN12P56749 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CLDN12P56749 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN12P56749 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLDN12P56749 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN12P56749 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CLDN12P56749 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN12P56749 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN12P56749 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN12P56749 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN12P56749 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN12P56749 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.63■□□□□ 0.57
CLDN12P56749 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN12P56749 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CLDN12P56749 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLDN12P56749 AC009102.2-201ENST00000606772 1639 ntBASIC18.63■□□□□ 0.57
CLDN12P56749 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN12P56749 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN12P56749 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN12P56749 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN12P56749 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN12P56749 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CLDN12P56749 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN12P56749 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CLDN12P56749 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN12P56749 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN12P56749 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CLDN12P56749 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN12P56749 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN12P56749 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLDN12P56749 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN12P56749 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN12P56749 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN12P56749 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN12P56749 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.61■□□□□ 0.57
CLDN12P56749 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN12P56749 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN12P56749 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN12P56749 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.61■□□□□ 0.57
CLDN12P56749 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN12P56749 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN12P56749 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN12P56749 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN12P56749 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN12P56749 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN12P56749 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN12P56749 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
CLDN12P56749 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN12P56749 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN12P56749 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.6■□□□□ 0.57
CLDN12P56749 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.6■□□□□ 0.57
CLDN12P56749 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLDN12P56749 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLDN12P56749 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CLDN12P56749 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLDN12P56749 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN12P56749 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN12P56749 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN12P56749 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CLDN12P56749 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN12P56749 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN12P56749 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN12P56749 LINC01521-201ENST00000504184 1943 ntBASIC18.59■□□□□ 0.57
CLDN12P56749 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CLDN12P56749 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN12P56749 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN12P56749 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN12P56749 YBX1P4-201ENST00000392794 808 ntBASIC18.59■□□□□ 0.57
CLDN12P56749 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CLDN12P56749 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN12P56749 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN12P56749 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN12P56749 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN12P56749 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN12P56749 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN12P56749 AC092667.1-201ENST00000434301 2586 ntBASIC18.58■□□□□ 0.57
CLDN12P56749 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.58■□□□□ 0.57
CLDN12P56749 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN12P56749 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN12P56749 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN12P56749 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
CLDN12P56749 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CLDN12P56749 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CLDN12P56749 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN12P56749 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN12P56749 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN12P56749 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN12P56749 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN12P56749 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN12P56749 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CLDN12P56749 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CLDN12P56749 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN12P56749 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN12P56749 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN12P56749 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN12P56749 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN12P56749 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN12P56749 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.57■□□□□ 0.56
CLDN12P56749 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms