Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 AC024257.2-201ENST00000549699 147 ntBASIC20.35■□□□□ 0.85
WNT3P56703 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
WNT3P56703 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.35■□□□□ 0.85
WNT3P56703 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
WNT3P56703 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
WNT3P56703 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
WNT3P56703 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
WNT3P56703 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.34■□□□□ 0.85
WNT3P56703 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
WNT3P56703 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.34■□□□□ 0.85
WNT3P56703 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
WNT3P56703 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
WNT3P56703 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.34■□□□□ 0.85
WNT3P56703 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.34■□□□□ 0.85
WNT3P56703 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
WNT3P56703 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.34■□□□□ 0.85
WNT3P56703 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.34■□□□□ 0.85
WNT3P56703 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.34■□□□□ 0.85
WNT3P56703 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
WNT3P56703 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.34■□□□□ 0.85
WNT3P56703 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.34■□□□□ 0.85
WNT3P56703 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
WNT3P56703 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.34■□□□□ 0.85
WNT3P56703 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
WNT3P56703 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.33■□□□□ 0.85
WNT3P56703 AC135279.3-201ENST00000610945 1311 ntBASIC20.33■□□□□ 0.85
WNT3P56703 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
WNT3P56703 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.33■□□□□ 0.85
WNT3P56703 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.33■□□□□ 0.85
WNT3P56703 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.33■□□□□ 0.85
WNT3P56703 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.33■□□□□ 0.85
WNT3P56703 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
WNT3P56703 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
WNT3P56703 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
WNT3P56703 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.32■□□□□ 0.84
WNT3P56703 OXCT2P1-201ENST00000447263 1535 ntBASIC20.32■□□□□ 0.84
WNT3P56703 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
WNT3P56703 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
WNT3P56703 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
WNT3P56703 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
WNT3P56703 AL138724.1-201ENST00000606771 1088 ntBASIC20.32■□□□□ 0.84
WNT3P56703 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
WNT3P56703 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
WNT3P56703 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
WNT3P56703 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
WNT3P56703 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
WNT3P56703 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
WNT3P56703 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
WNT3P56703 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
WNT3P56703 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
WNT3P56703 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
WNT3P56703 SYT6-210ENST00000641643 1587 ntBASIC20.31■□□□□ 0.84
WNT3P56703 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
WNT3P56703 AC142381.2-201ENST00000566120 298 ntBASIC20.31■□□□□ 0.84
WNT3P56703 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.31■□□□□ 0.84
WNT3P56703 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
WNT3P56703 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
WNT3P56703 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
WNT3P56703 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
WNT3P56703 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
WNT3P56703 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
WNT3P56703 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.3■□□□□ 0.84
WNT3P56703 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3P56703 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.3■□□□□ 0.84
WNT3P56703 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3P56703 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3P56703 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3P56703 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
WNT3P56703 AC133561.4-201ENST00000566112 224 ntBASIC20.3■□□□□ 0.84
WNT3P56703 AL031432.3-201ENST00000607698 485 ntBASIC20.3■□□□□ 0.84
WNT3P56703 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
WNT3P56703 AC087239.1-201ENST00000622671 572 ntBASIC20.3■□□□□ 0.84
WNT3P56703 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.3■□□□□ 0.84
WNT3P56703 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
WNT3P56703 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
WNT3P56703 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.3■□□□□ 0.84
WNT3P56703 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.3■□□□□ 0.84
WNT3P56703 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.3■□□□□ 0.84
WNT3P56703 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
WNT3P56703 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
WNT3P56703 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.29■□□□□ 0.84
WNT3P56703 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.29■□□□□ 0.84
WNT3P56703 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
WNT3P56703 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
WNT3P56703 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
WNT3P56703 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.29■□□□□ 0.84
WNT3P56703 AC136469.2-201ENST00000623944 1028 ntBASIC20.29■□□□□ 0.84
WNT3P56703 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.29■□□□□ 0.84
WNT3P56703 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
WNT3P56703 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
WNT3P56703 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
WNT3P56703 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
WNT3P56703 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
WNT3P56703 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
WNT3P56703 FEM1AP4-201ENST00000443167 1987 ntBASIC20.28■□□□□ 0.84
WNT3P56703 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
WNT3P56703 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.28■□□□□ 0.84
WNT3P56703 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
WNT3P56703 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.28■□□□□ 0.84
WNT3P56703 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms