Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
APOC4P55056 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
APOC4P55056 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
APOC4P55056 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
APOC4P55056 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.73■□□□□ 0.11
APOC4P55056 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC15.73■□□□□ 0.11
APOC4P55056 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
APOC4P55056 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APOC4P55056 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
APOC4P55056 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
APOC4P55056 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC15.72■□□□□ 0.11
APOC4P55056 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APOC4P55056 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
APOC4P55056 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.72■□□□□ 0.11
APOC4P55056 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.72■□□□□ 0.11
APOC4P55056 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
APOC4P55056 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.72■□□□□ 0.11
APOC4P55056 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
APOC4P55056 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.72■□□□□ 0.11
APOC4P55056 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.72■□□□□ 0.11
APOC4P55056 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.72■□□□□ 0.11
APOC4P55056 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.72■□□□□ 0.11
APOC4P55056 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
APOC4P55056 IKBKGP1-201ENST00000612193 1073 ntBASIC15.72■□□□□ 0.11
APOC4P55056 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
APOC4P55056 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC15.72■□□□□ 0.11
APOC4P55056 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APOC4P55056 ESRRAP2-201ENST00000418437 1549 ntBASIC15.72■□□□□ 0.11
APOC4P55056 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
APOC4P55056 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
APOC4P55056 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APOC4P55056 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
APOC4P55056 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APOC4P55056 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APOC4P55056 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
APOC4P55056 AC004911.1-201ENST00000416316 871 ntBASIC15.71■□□□□ 0.11
APOC4P55056 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.71■□□□□ 0.11
APOC4P55056 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.71■□□□□ 0.11
APOC4P55056 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
APOC4P55056 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
APOC4P55056 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APOC4P55056 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.71■□□□□ 0.11
APOC4P55056 LINC00526-201ENST00000581067 1875 ntBASIC15.71■□□□□ 0.11
APOC4P55056 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
APOC4P55056 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
APOC4P55056 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
APOC4P55056 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
APOC4P55056 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
APOC4P55056 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
APOC4P55056 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOC4P55056 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
APOC4P55056 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOC4P55056 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOC4P55056 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOC4P55056 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
APOC4P55056 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.7■□□□□ 0.1
APOC4P55056 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.7■□□□□ 0.1
APOC4P55056 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
APOC4P55056 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.7■□□□□ 0.1
APOC4P55056 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
APOC4P55056 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOC4P55056 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC15.7■□□□□ 0.1
APOC4P55056 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
APOC4P55056 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
APOC4P55056 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOC4P55056 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.69■□□□□ 0.1
APOC4P55056 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC4P55056 AC087742.1-201ENST00000575880 1738 ntBASIC15.69■□□□□ 0.1
APOC4P55056 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC4P55056 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC4P55056 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC4P55056 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
APOC4P55056 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
APOC4P55056 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC4P55056 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOC4P55056 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC4P55056 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOC4P55056 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC4P55056 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
APOC4P55056 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.69■□□□□ 0.1
APOC4P55056 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.69■□□□□ 0.1
APOC4P55056 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC4P55056 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
APOC4P55056 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC4P55056 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOC4P55056 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.69■□□□□ 0.1
APOC4P55056 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC15.69■□□□□ 0.1
APOC4P55056 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC4P55056 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC4P55056 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC15.69■□□□□ 0.1
APOC4P55056 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC4P55056 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
APOC4P55056 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC4P55056 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APOC4P55056 AC137767.1-201ENST00000602918 1920 ntBASIC15.68■□□□□ 0.1
APOC4P55056 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC4P55056 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC15.68■□□□□ 0.1
APOC4P55056 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC4P55056 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC15.68■□□□□ 0.1
APOC4P55056 AC055733.4-201ENST00000638462 1354 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms