Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.24■□□□□ 0.99
CLNS1AP54105 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.24■□□□□ 0.99
CLNS1AP54105 AL020996.1-203ENST00000536896 2307 ntBASIC21.23■□□□□ 0.99
CLNS1AP54105 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CLNS1AP54105 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLNS1AP54105 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
CLNS1AP54105 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.23■□□□□ 0.99
CLNS1AP54105 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLNS1AP54105 AC137630.3-201ENST00000607245 391 ntBASIC21.23■□□□□ 0.99
CLNS1AP54105 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLNS1AP54105 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.23■□□□□ 0.99
CLNS1AP54105 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLNS1AP54105 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLNS1AP54105 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.23■□□□□ 0.99
CLNS1AP54105 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLNS1AP54105 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CLNS1AP54105 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLNS1AP54105 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CLNS1AP54105 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLNS1AP54105 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLNS1AP54105 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLNS1AP54105 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CLNS1AP54105 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CLNS1AP54105 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CLNS1AP54105 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.22■□□□□ 0.99
CLNS1AP54105 AC103724.3-201ENST00000564481 992 ntBASIC21.22■□□□□ 0.99
CLNS1AP54105 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.22■□□□□ 0.99
CLNS1AP54105 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.22■□□□□ 0.99
CLNS1AP54105 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLNS1AP54105 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLNS1AP54105 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLNS1AP54105 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CLNS1AP54105 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CLNS1AP54105 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLNS1AP54105 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLNS1AP54105 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLNS1AP54105 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CLNS1AP54105 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.21■□□□□ 0.99
CLNS1AP54105 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLNS1AP54105 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.21■□□□□ 0.99
CLNS1AP54105 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CLNS1AP54105 AL033527.3-201ENST00000566366 1196 ntBASIC21.21■□□□□ 0.99
CLNS1AP54105 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.21■□□□□ 0.99
CLNS1AP54105 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.21■□□□□ 0.99
CLNS1AP54105 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLNS1AP54105 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.21■□□□□ 0.99
CLNS1AP54105 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.21■□□□□ 0.99
CLNS1AP54105 AC139530.1-201ENST00000575312 1977 ntBASIC21.21■□□□□ 0.99
CLNS1AP54105 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLNS1AP54105 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLNS1AP54105 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLNS1AP54105 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLNS1AP54105 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLNS1AP54105 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLNS1AP54105 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLNS1AP54105 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLNS1AP54105 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLNS1AP54105 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLNS1AP54105 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLNS1AP54105 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLNS1AP54105 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLNS1AP54105 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLNS1AP54105 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
CLNS1AP54105 KRT8P33-201ENST00000508125 1423 ntBASIC21.2■□□□□ 0.98
CLNS1AP54105 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLNS1AP54105 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLNS1AP54105 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLNS1AP54105 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
CLNS1AP54105 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLNS1AP54105 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLNS1AP54105 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLNS1AP54105 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
CLNS1AP54105 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.19■□□□□ 0.98
CLNS1AP54105 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.19■□□□□ 0.98
CLNS1AP54105 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLNS1AP54105 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.19■□□□□ 0.98
CLNS1AP54105 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLNS1AP54105 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
CLNS1AP54105 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLNS1AP54105 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLNS1AP54105 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLNS1AP54105 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLNS1AP54105 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLNS1AP54105 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.18■□□□□ 0.98
CLNS1AP54105 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLNS1AP54105 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLNS1AP54105 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.17■□□□□ 0.98
CLNS1AP54105 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLNS1AP54105 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CLNS1AP54105 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLNS1AP54105 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLNS1AP54105 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.17■□□□□ 0.98
CLNS1AP54105 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLNS1AP54105 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.17■□□□□ 0.98
CLNS1AP54105 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.17■□□□□ 0.98
CLNS1AP54105 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.17■□□□□ 0.98
CLNS1AP54105 AC005703.6-201ENST00000623265 1329 ntBASIC21.17■□□□□ 0.98
CLNS1AP54105 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.17■□□□□ 0.98
CLNS1AP54105 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CLNS1AP54105 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms