Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.07■□□□□ 0.96
CLCNKAP51800 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCNKAP51800 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.07■□□□□ 0.96
CLCNKAP51800 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLCNKAP51800 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.06■□□□□ 0.96
CLCNKAP51800 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCNKAP51800 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLCNKAP51800 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCNKAP51800 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCNKAP51800 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CLCNKAP51800 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.06■□□□□ 0.96
CLCNKAP51800 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCNKAP51800 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CLCNKAP51800 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.06■□□□□ 0.96
CLCNKAP51800 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCNKAP51800 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCNKAP51800 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCNKAP51800 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCNKAP51800 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCNKAP51800 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.06■□□□□ 0.96
CLCNKAP51800 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCNKAP51800 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLCNKAP51800 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.05■□□□□ 0.96
CLCNKAP51800 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCNKAP51800 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLCNKAP51800 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CLCNKAP51800 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CLCNKAP51800 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCNKAP51800 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.05■□□□□ 0.96
CLCNKAP51800 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.05■□□□□ 0.96
CLCNKAP51800 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.05■□□□□ 0.96
CLCNKAP51800 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.05■□□□□ 0.96
CLCNKAP51800 AC022517.1-201ENST00000592429 346 ntBASIC21.05■□□□□ 0.96
CLCNKAP51800 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLCNKAP51800 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.05■□□□□ 0.96
CLCNKAP51800 AC055733.4-201ENST00000638462 1354 ntBASIC21.05■□□□□ 0.96
CLCNKAP51800 AP004607.4-201ENST00000530158 1459 ntBASIC21.05■□□□□ 0.96
CLCNKAP51800 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCNKAP51800 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.05■□□□□ 0.96
CLCNKAP51800 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.04■□□□□ 0.96
CLCNKAP51800 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCNKAP51800 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CLCNKAP51800 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.04■□□□□ 0.96
CLCNKAP51800 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCNKAP51800 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CLCNKAP51800 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCNKAP51800 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.04■□□□□ 0.96
CLCNKAP51800 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CLCNKAP51800 AC079140.4-201ENST00000507448 529 ntBASIC21.04■□□□□ 0.96
CLCNKAP51800 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.04■□□□□ 0.96
CLCNKAP51800 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCNKAP51800 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
CLCNKAP51800 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.04■□□□□ 0.96
CLCNKAP51800 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.04■□□□□ 0.96
CLCNKAP51800 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCNKAP51800 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCNKAP51800 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCNKAP51800 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CLCNKAP51800 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.03■□□□□ 0.96
CLCNKAP51800 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCNKAP51800 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CLCNKAP51800 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCNKAP51800 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.03■□□□□ 0.96
CLCNKAP51800 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.03■□□□□ 0.96
CLCNKAP51800 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.03■□□□□ 0.96
CLCNKAP51800 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.03■□□□□ 0.96
CLCNKAP51800 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.03■□□□□ 0.96
CLCNKAP51800 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCNKAP51800 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCNKAP51800 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCNKAP51800 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCNKAP51800 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCNKAP51800 AC233723.2-201ENST00000623798 2106 ntBASIC21.02■□□□□ 0.96
CLCNKAP51800 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CLCNKAP51800 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
CLCNKAP51800 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CLCNKAP51800 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLCNKAP51800 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.02■□□□□ 0.96
CLCNKAP51800 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLCNKAP51800 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.02■□□□□ 0.96
CLCNKAP51800 KRT18P61-201ENST00000585825 1298 ntBASIC21.02■□□□□ 0.96
CLCNKAP51800 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.02■□□□□ 0.96
CLCNKAP51800 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCNKAP51800 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CLCNKAP51800 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCNKAP51800 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCNKAP51800 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCNKAP51800 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCNKAP51800 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCNKAP51800 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
CLCNKAP51800 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCNKAP51800 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CLCNKAP51800 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.01■□□□□ 0.95
CLCNKAP51800 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.01■□□□□ 0.95
CLCNKAP51800 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.01■□□□□ 0.95
CLCNKAP51800 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CLCNKAP51800 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCNKAP51800 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCNKAP51800 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLCNKAP51800 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms