Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF144AP50876 AC233992.3-201ENST00000607491 485 ntBASIC19.9■□□□□ 0.78
RNF144AP50876 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF144AP50876 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF144AP50876 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF144AP50876 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF144AP50876 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF144AP50876 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF144AP50876 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF144AP50876 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF144AP50876 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF144AP50876 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF144AP50876 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF144AP50876 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF144AP50876 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF144AP50876 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF144AP50876 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF144AP50876 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF144AP50876 BX842568.3-201ENST00000418104 571 ntBASIC19.89■□□□□ 0.77
RNF144AP50876 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF144AP50876 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RNF144AP50876 AP001330.3-201ENST00000520123 633 ntBASIC19.89■□□□□ 0.77
RNF144AP50876 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF144AP50876 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF144AP50876 OR7E47P-201ENST00000546390 1422 ntBASIC19.89■□□□□ 0.77
RNF144AP50876 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RNF144AP50876 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF144AP50876 AC087239.1-201ENST00000622671 572 ntBASIC19.89■□□□□ 0.77
RNF144AP50876 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RNF144AP50876 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF144AP50876 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF144AP50876 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RNF144AP50876 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
RNF144AP50876 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RNF144AP50876 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RNF144AP50876 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF144AP50876 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF144AP50876 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF144AP50876 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF144AP50876 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.87■□□□□ 0.77
RNF144AP50876 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RNF144AP50876 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF144AP50876 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF144AP50876 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RNF144AP50876 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF144AP50876 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF144AP50876 AC010542.4-201ENST00000563151 1910 ntBASIC19.87■□□□□ 0.77
RNF144AP50876 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF144AP50876 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.87■□□□□ 0.77
RNF144AP50876 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
RNF144AP50876 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF144AP50876 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RNF144AP50876 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF144AP50876 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF144AP50876 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF144AP50876 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF144AP50876 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF144AP50876 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF144AP50876 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF144AP50876 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RNF144AP50876 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF144AP50876 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RNF144AP50876 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF144AP50876 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF144AP50876 AL139246.5-201ENST00000606645 996 ntBASIC19.86■□□□□ 0.77
RNF144AP50876 AL031432.3-201ENST00000607698 485 ntBASIC19.86■□□□□ 0.77
RNF144AP50876 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF144AP50876 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF144AP50876 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF144AP50876 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RNF144AP50876 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF144AP50876 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RNF144AP50876 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF144AP50876 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF144AP50876 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
RNF144AP50876 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RNF144AP50876 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF144AP50876 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF144AP50876 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF144AP50876 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF144AP50876 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms