Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 AC104564.3-201ENST00000582367 638 ntBASIC21.09■□□□□ 0.97
SLC1A6P48664 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLC1A6P48664 AL031602.1-201ENST00000633169 911 ntBASIC21.09■□□□□ 0.97
SLC1A6P48664 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC1A6P48664 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC1A6P48664 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC1A6P48664 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SLC1A6P48664 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC1A6P48664 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.09■□□□□ 0.97
SLC1A6P48664 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC1A6P48664 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC1A6P48664 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLC1A6P48664 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SLC1A6P48664 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.08■□□□□ 0.97
SLC1A6P48664 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SLC1A6P48664 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SLC1A6P48664 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SLC1A6P48664 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC1A6P48664 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SLC1A6P48664 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.96
SLC1A6P48664 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SLC1A6P48664 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.08■□□□□ 0.96
SLC1A6P48664 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SLC1A6P48664 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC1A6P48664 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC1A6P48664 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.07■□□□□ 0.96
SLC1A6P48664 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC1A6P48664 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC1A6P48664 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC1A6P48664 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SLC1A6P48664 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.07■□□□□ 0.96
SLC1A6P48664 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC1A6P48664 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC1A6P48664 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC1A6P48664 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC1A6P48664 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC1A6P48664 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SLC1A6P48664 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC1A6P48664 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.06■□□□□ 0.96
SLC1A6P48664 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC1A6P48664 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC1A6P48664 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC1A6P48664 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC1A6P48664 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.06■□□□□ 0.96
SLC1A6P48664 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
SLC1A6P48664 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC1A6P48664 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC1A6P48664 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.06■□□□□ 0.96
SLC1A6P48664 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC1A6P48664 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC1A6P48664 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC1A6P48664 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
SLC1A6P48664 LINC01521-201ENST00000504184 1943 ntBASIC21.06■□□□□ 0.96
SLC1A6P48664 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC1A6P48664 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC1A6P48664 OR7E47P-201ENST00000546390 1422 ntBASIC21.05■□□□□ 0.96
SLC1A6P48664 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC1A6P48664 KRT125P-201ENST00000546827 989 ntBASIC21.05■□□□□ 0.96
SLC1A6P48664 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC1A6P48664 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC1A6P48664 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC1A6P48664 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC1A6P48664 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC1A6P48664 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SLC1A6P48664 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC1A6P48664 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.04■□□□□ 0.96
SLC1A6P48664 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A6P48664 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
SLC1A6P48664 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
SLC1A6P48664 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A6P48664 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.04■□□□□ 0.96
SLC1A6P48664 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A6P48664 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A6P48664 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A6P48664 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A6P48664 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC1A6P48664 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A6P48664 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A6P48664 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SLC1A6P48664 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SLC1A6P48664 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A6P48664 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SLC1A6P48664 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A6P48664 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A6P48664 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A6P48664 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC1A6P48664 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A6P48664 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC1A6P48664 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.03■□□□□ 0.96
SLC1A6P48664 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A6P48664 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A6P48664 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC1A6P48664 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SLC1A6P48664 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A6P48664 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC1A6P48664 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.03■□□□□ 0.96
SLC1A6P48664 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A6P48664 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC1A6P48664 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.03■□□□□ 0.96
SLC1A6P48664 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms