Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX2-1P43699 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NKX2-1P43699 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX2-1P43699 BHLHE23-202ENST00000612929 1109 ntBASIC17.53■□□□□ 0.4
NKX2-1P43699 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
NKX2-1P43699 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX2-1P43699 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NKX2-1P43699 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NKX2-1P43699 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX2-1P43699 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.53■□□□□ 0.4
NKX2-1P43699 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX2-1P43699 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NKX2-1P43699 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX2-1P43699 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.52■□□□□ 0.4
NKX2-1P43699 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NKX2-1P43699 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX2-1P43699 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.52■□□□□ 0.4
NKX2-1P43699 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.52■□□□□ 0.4
NKX2-1P43699 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.52■□□□□ 0.4
NKX2-1P43699 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NKX2-1P43699 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX2-1P43699 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX2-1P43699 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NKX2-1P43699 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX2-1P43699 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
NKX2-1P43699 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.52■□□□□ 0.4
NKX2-1P43699 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
NKX2-1P43699 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NKX2-1P43699 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
NKX2-1P43699 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NKX2-1P43699 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
NKX2-1P43699 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.52■□□□□ 0.39
NKX2-1P43699 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.51■□□□□ 0.39
NKX2-1P43699 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NKX2-1P43699 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NKX2-1P43699 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NKX2-1P43699 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.51■□□□□ 0.39
NKX2-1P43699 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
NKX2-1P43699 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NKX2-1P43699 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.51■□□□□ 0.39
NKX2-1P43699 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.51■□□□□ 0.39
NKX2-1P43699 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.51■□□□□ 0.39
NKX2-1P43699 DUX4L18-201ENST00000553347 1267 ntBASIC17.51■□□□□ 0.39
NKX2-1P43699 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX2-1P43699 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
NKX2-1P43699 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.51■□□□□ 0.39
NKX2-1P43699 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX2-1P43699 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NKX2-1P43699 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-1P43699 AC005703.6-201ENST00000623265 1329 ntBASIC17.5■□□□□ 0.39
NKX2-1P43699 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NKX2-1P43699 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.5■□□□□ 0.39
NKX2-1P43699 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-1P43699 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.5■□□□□ 0.39
NKX2-1P43699 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-1P43699 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-1P43699 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-1P43699 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.5■□□□□ 0.39
NKX2-1P43699 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-1P43699 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX2-1P43699 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.49■□□□□ 0.39
NKX2-1P43699 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.49■□□□□ 0.39
NKX2-1P43699 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.49■□□□□ 0.39
NKX2-1P43699 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-1P43699 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-1P43699 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-1P43699 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.49■□□□□ 0.39
NKX2-1P43699 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.49■□□□□ 0.39
NKX2-1P43699 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-1P43699 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
NKX2-1P43699 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
NKX2-1P43699 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.49■□□□□ 0.39
NKX2-1P43699 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.49■□□□□ 0.39
NKX2-1P43699 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NKX2-1P43699 AC074183.2-201ENST00000623112 922 ntBASIC17.49■□□□□ 0.39
NKX2-1P43699 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-1P43699 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-1P43699 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-1P43699 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NKX2-1P43699 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-1P43699 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-1P43699 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-1P43699 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-1P43699 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.49■□□□□ 0.39
NKX2-1P43699 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX2-1P43699 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-1P43699 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-1P43699 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-1P43699 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
NKX2-1P43699 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-1P43699 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-1P43699 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-1P43699 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-1P43699 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-1P43699 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.48■□□□□ 0.39
NKX2-1P43699 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-1P43699 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.48■□□□□ 0.39
NKX2-1P43699 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-1P43699 ATP5G2P3-201ENST00000429083 425 ntBASIC17.48■□□□□ 0.39
NKX2-1P43699 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms