Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 MIR4767-201ENST00000582827 78 ntBASIC20.32■□□□□ 0.84
KRT20P35900 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.32■□□□□ 0.84
KRT20P35900 AL139246.5-201ENST00000606645 996 ntBASIC20.32■□□□□ 0.84
KRT20P35900 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT20P35900 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
KRT20P35900 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT20P35900 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT20P35900 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT20P35900 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT20P35900 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT20P35900 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
KRT20P35900 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT20P35900 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT20P35900 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT20P35900 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.31■□□□□ 0.84
KRT20P35900 OR2I1P-207ENST00000453522 948 ntBASIC20.31■□□□□ 0.84
KRT20P35900 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
KRT20P35900 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT20P35900 AC106739.1-201ENST00000617035 715 ntBASIC20.31■□□□□ 0.84
KRT20P35900 AC110285.6-201ENST00000617652 491 ntBASIC20.31■□□□□ 0.84
KRT20P35900 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.31■□□□□ 0.84
KRT20P35900 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT20P35900 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT20P35900 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
KRT20P35900 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT20P35900 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT20P35900 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT20P35900 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT20P35900 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT20P35900 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.31■□□□□ 0.84
KRT20P35900 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT20P35900 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT20P35900 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
KRT20P35900 AC080038.3-201ENST00000623346 1952 ntBASIC20.3■□□□□ 0.84
KRT20P35900 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT20P35900 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT20P35900 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
KRT20P35900 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT20P35900 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
KRT20P35900 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT20P35900 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
KRT20P35900 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
KRT20P35900 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT20P35900 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT20P35900 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT20P35900 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT20P35900 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT20P35900 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT20P35900 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
KRT20P35900 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
KRT20P35900 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT20P35900 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT20P35900 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT20P35900 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
KRT20P35900 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.29■□□□□ 0.84
KRT20P35900 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT20P35900 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
KRT20P35900 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
KRT20P35900 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
KRT20P35900 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT20P35900 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT20P35900 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT20P35900 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
KRT20P35900 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT20P35900 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT20P35900 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT20P35900 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
KRT20P35900 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT20P35900 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT20P35900 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT20P35900 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT20P35900 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT20P35900 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT20P35900 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.27■□□□□ 0.84
KRT20P35900 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT20P35900 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT20P35900 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT20P35900 LINC01960-201ENST00000563759 1884 ntBASIC20.27■□□□□ 0.84
KRT20P35900 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT20P35900 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.27■□□□□ 0.84
KRT20P35900 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
KRT20P35900 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.27■□□□□ 0.84
KRT20P35900 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.27■□□□□ 0.84
KRT20P35900 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
KRT20P35900 AC087239.1-201ENST00000622671 572 ntBASIC20.27■□□□□ 0.84
KRT20P35900 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT20P35900 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
KRT20P35900 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KRT20P35900 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT20P35900 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT20P35900 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT20P35900 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT20P35900 EDA-201ENST00000338901 1233 ntBASIC20.26■□□□□ 0.83
KRT20P35900 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT20P35900 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KRT20P35900 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KRT20P35900 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT20P35900 AC068587.7-201ENST00000641602 218 ntBASIC20.26■□□□□ 0.83
KRT20P35900 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT20P35900 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms