Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RPS2P52-201ENST00000469610 820 ntBASIC27.25■■□□□ 1.95
RFC4P35249 AC007322.4-201ENST00000509611 723 ntBASIC27.25■■□□□ 1.95
RFC4P35249 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
RFC4P35249 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RFC4P35249 ARL16-209ENST00000573715 763 ntTSL 3 BASIC27.25■■□□□ 1.95
RFC4P35249 ARL16-211ENST00000576135 694 ntTSL 3 BASIC27.25■■□□□ 1.95
RFC4P35249 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC27.25■■□□□ 1.95
RFC4P35249 AC092118.2-201ENST00000613495 667 ntBASIC27.25■■□□□ 1.95
RFC4P35249 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
RFC4P35249 AC008694.1-202ENST00000636953 945 ntBASIC27.25■■□□□ 1.95
RFC4P35249 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
RFC4P35249 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RFC4P35249 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC27.24■■□□□ 1.95
RFC4P35249 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
RFC4P35249 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RFC4P35249 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC27.24■■□□□ 1.95
RFC4P35249 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC27.24■■□□□ 1.95
RFC4P35249 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RFC4P35249 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RFC4P35249 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
RFC4P35249 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
RFC4P35249 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
RFC4P35249 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC27.24■■□□□ 1.95
RFC4P35249 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
RFC4P35249 AC093787.1-201ENST00000450396 207 ntBASIC27.24■■□□□ 1.95
RFC4P35249 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RFC4P35249 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC27.24■■□□□ 1.95
RFC4P35249 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RFC4P35249 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.24■■□□□ 1.95
RFC4P35249 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RFC4P35249 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.24■■□□□ 1.95
RFC4P35249 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC27.24■■□□□ 1.95
RFC4P35249 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
RFC4P35249 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RFC4P35249 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RFC4P35249 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RFC4P35249 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RFC4P35249 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RFC4P35249 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC27.23■■□□□ 1.95
RFC4P35249 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC27.23■■□□□ 1.95
RFC4P35249 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC27.23■■□□□ 1.95
RFC4P35249 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC27.23■■□□□ 1.95
RFC4P35249 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RFC4P35249 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
RFC4P35249 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC27.22■■□□□ 1.95
RFC4P35249 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RFC4P35249 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC27.22■■□□□ 1.95
RFC4P35249 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RFC4P35249 AL512625.2-201ENST00000417533 625 ntBASIC27.22■■□□□ 1.95
RFC4P35249 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC27.22■■□□□ 1.95
RFC4P35249 AC069236.1-201ENST00000604339 616 ntBASIC27.22■■□□□ 1.95
RFC4P35249 AC016405.3-201ENST00000607710 860 ntBASIC27.22■■□□□ 1.95
RFC4P35249 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
RFC4P35249 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC27.22■■□□□ 1.95
RFC4P35249 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
RFC4P35249 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RFC4P35249 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
RFC4P35249 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
RFC4P35249 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC27.21■■□□□ 1.95
RFC4P35249 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC27.21■■□□□ 1.95
RFC4P35249 DUSP5P2-201ENST00000426873 1033 ntBASIC27.21■■□□□ 1.95
RFC4P35249 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
RFC4P35249 RARRES2P4-201ENST00000514074 484 ntBASIC27.21■■□□□ 1.95
RFC4P35249 EEF1DP3-203ENST00000566025 782 ntBASIC27.21■■□□□ 1.95
RFC4P35249 PLLP-204ENST00000569059 665 ntTSL 3 BASIC27.21■■□□□ 1.95
RFC4P35249 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC27.21■■□□□ 1.95
RFC4P35249 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RFC4P35249 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC27.21■■□□□ 1.95
RFC4P35249 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RFC4P35249 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RFC4P35249 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RFC4P35249 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC27.2■■□□□ 1.95
RFC4P35249 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.95
RFC4P35249 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
RFC4P35249 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.95
RFC4P35249 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
RFC4P35249 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
RFC4P35249 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC27.2■■□□□ 1.94
RFC4P35249 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
RFC4P35249 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
RFC4P35249 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RFC4P35249 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
RFC4P35249 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RFC4P35249 BX276092.2-201ENST00000417668 665 ntBASIC27.19■■□□□ 1.94
RFC4P35249 AC098590.1-201ENST00000468126 897 ntBASIC27.19■■□□□ 1.94
RFC4P35249 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC27.19■■□□□ 1.94
RFC4P35249 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC27.19■■□□□ 1.94
RFC4P35249 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC27.19■■□□□ 1.94
RFC4P35249 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC27.19■■□□□ 1.94
RFC4P35249 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RFC4P35249 AP006294.2-201ENST00000641667 209 ntBASIC27.19■■□□□ 1.94
RFC4P35249 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RFC4P35249 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RFC4P35249 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RFC4P35249 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RFC4P35249 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RFC4P35249 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RFC4P35249 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RFC4P35249 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
RFC4P35249 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC27.18■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms