Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC008764.7-201ENST00000593779 1081 ntBASIC20.01■□□□□ 0.79
CHMP24386 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP24386 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP24386 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CHMP24386 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP24386 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CHMP24386 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.01■□□□□ 0.79
CHMP24386 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.01■□□□□ 0.79
CHMP24386 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP24386 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP24386 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP24386 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20■□□□□ 0.79
CHMP24386 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP24386 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHMP24386 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP24386 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CHMP24386 MIR935-201ENST00000401179 91 ntBASIC20■□□□□ 0.79
CHMP24386 OR2I1P-207ENST00000453522 948 ntBASIC20■□□□□ 0.79
CHMP24386 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20■□□□□ 0.79
CHMP24386 MPST-208ENST00000628507 698 ntTSL 5 BASIC20■□□□□ 0.79
CHMP24386 PKD1P6-201ENST00000343738 4769 ntBASIC20■□□□□ 0.79
CHMP24386 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP24386 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP24386 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CHMP24386 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP24386 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP24386 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP24386 LINC01960-201ENST00000563759 1884 ntBASIC19.99■□□□□ 0.79
CHMP24386 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.99■□□□□ 0.79
CHMP24386 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.99■□□□□ 0.79
CHMP24386 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP24386 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP24386 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.99■□□□□ 0.79
CHMP24386 AC099791.1-201ENST00000416440 715 ntBASIC19.99■□□□□ 0.79
CHMP24386 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP24386 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CHMP24386 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.99■□□□□ 0.79
CHMP24386 CA15P2-201ENST00000611168 834 ntBASIC19.99■□□□□ 0.79
CHMP24386 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.99■□□□□ 0.79
CHMP24386 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP24386 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CHMP24386 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP24386 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP24386 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP24386 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CHMP24386 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CHMP24386 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CHMP24386 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CHMP24386 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.98■□□□□ 0.79
CHMP24386 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP24386 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP24386 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.98■□□□□ 0.79
CHMP24386 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP24386 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.98■□□□□ 0.79
CHMP24386 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP24386 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CHMP24386 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.98■□□□□ 0.79
CHMP24386 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CHMP24386 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.97■□□□□ 0.79
CHMP24386 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.97■□□□□ 0.79
CHMP24386 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CHMP24386 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP24386 SLC47A1P1-202ENST00000449666 945 ntBASIC19.97■□□□□ 0.79
CHMP24386 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.97■□□□□ 0.79
CHMP24386 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP24386 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CHMP24386 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP24386 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.97■□□□□ 0.79
CHMP24386 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP24386 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP24386 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP24386 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.96■□□□□ 0.79
CHMP24386 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP24386 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP24386 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.96■□□□□ 0.79
CHMP24386 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
CHMP24386 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.96■□□□□ 0.79
CHMP24386 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.96■□□□□ 0.79
CHMP24386 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CHMP24386 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.96■□□□□ 0.79
CHMP24386 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP24386 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CHMP24386 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP24386 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
CHMP24386 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP24386 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CHMP24386 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP24386 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP24386 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP24386 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CHMP24386 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.95■□□□□ 0.78
CHMP24386 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
CHMP24386 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CHMP24386 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CHMP24386 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.95■□□□□ 0.78
CHMP24386 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP24386 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.95■□□□□ 0.78
CHMP24386 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP24386 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP24386 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms