Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS4Y1P22090 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4Y1P22090 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4Y1P22090 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4Y1P22090 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4Y1P22090 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4Y1P22090 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RPS4Y1P22090 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
RPS4Y1P22090 AP004607.7-201ENST00000527152 1677 ntBASIC19.73■□□□□ 0.75
RPS4Y1P22090 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4Y1P22090 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4Y1P22090 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4Y1P22090 IGHV3-19-201ENST00000521488 291 ntBASIC19.73■□□□□ 0.75
RPS4Y1P22090 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.73■□□□□ 0.75
RPS4Y1P22090 SMUG1P1-201ENST00000590640 811 ntBASIC19.73■□□□□ 0.75
RPS4Y1P22090 AC106739.1-201ENST00000617035 715 ntBASIC19.73■□□□□ 0.75
RPS4Y1P22090 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4Y1P22090 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.73■□□□□ 0.75
RPS4Y1P22090 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.73■□□□□ 0.75
RPS4Y1P22090 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.73■□□□□ 0.75
RPS4Y1P22090 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4Y1P22090 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4Y1P22090 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.72■□□□□ 0.75
RPS4Y1P22090 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.72■□□□□ 0.75
RPS4Y1P22090 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS4Y1P22090 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.72■□□□□ 0.75
RPS4Y1P22090 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.72■□□□□ 0.75
RPS4Y1P22090 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.72■□□□□ 0.75
RPS4Y1P22090 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.72■□□□□ 0.75
RPS4Y1P22090 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS4Y1P22090 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RPS4Y1P22090 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS4Y1P22090 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS4Y1P22090 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RPS4Y1P22090 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.71■□□□□ 0.75
RPS4Y1P22090 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS4Y1P22090 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
RPS4Y1P22090 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS4Y1P22090 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPS4Y1P22090 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS4Y1P22090 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS4Y1P22090 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS4Y1P22090 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS4Y1P22090 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.71■□□□□ 0.75
RPS4Y1P22090 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RPS4Y1P22090 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RPS4Y1P22090 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.71■□□□□ 0.75
RPS4Y1P22090 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.71■□□□□ 0.75
RPS4Y1P22090 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS4Y1P22090 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.71■□□□□ 0.75
RPS4Y1P22090 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS4Y1P22090 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPS4Y1P22090 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.7■□□□□ 0.74
RPS4Y1P22090 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.7■□□□□ 0.74
RPS4Y1P22090 AC027682.1-201ENST00000562846 899 ntBASIC19.7■□□□□ 0.74
RPS4Y1P22090 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.7■□□□□ 0.74
RPS4Y1P22090 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.7■□□□□ 0.74
RPS4Y1P22090 AC126544.1-201ENST00000580842 1059 ntBASIC19.7■□□□□ 0.74
RPS4Y1P22090 AC104564.3-201ENST00000582367 638 ntBASIC19.7■□□□□ 0.74
RPS4Y1P22090 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.7■□□□□ 0.74
RPS4Y1P22090 AC110285.6-201ENST00000617652 491 ntBASIC19.7■□□□□ 0.74
RPS4Y1P22090 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RPS4Y1P22090 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RPS4Y1P22090 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPS4Y1P22090 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPS4Y1P22090 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS4Y1P22090 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS4Y1P22090 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.7■□□□□ 0.74
RPS4Y1P22090 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.7■□□□□ 0.74
RPS4Y1P22090 Z98882.1-201ENST00000622160 2253 ntBASIC19.69■□□□□ 0.74
RPS4Y1P22090 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPS4Y1P22090 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPS4Y1P22090 EDA-201ENST00000338901 1233 ntBASIC19.69■□□□□ 0.74
RPS4Y1P22090 PBX2P1-201ENST00000493219 1291 ntBASIC19.69■□□□□ 0.74
RPS4Y1P22090 AP001330.3-201ENST00000520123 633 ntBASIC19.69■□□□□ 0.74
RPS4Y1P22090 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPS4Y1P22090 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.69■□□□□ 0.74
RPS4Y1P22090 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
RPS4Y1P22090 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.69■□□□□ 0.74
RPS4Y1P22090 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.69■□□□□ 0.74
RPS4Y1P22090 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.69■□□□□ 0.74
RPS4Y1P22090 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPS4Y1P22090 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.68■□□□□ 0.74
RPS4Y1P22090 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.68■□□□□ 0.74
RPS4Y1P22090 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPS4Y1P22090 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPS4Y1P22090 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPS4Y1P22090 AC099791.1-201ENST00000416440 715 ntBASIC19.68■□□□□ 0.74
RPS4Y1P22090 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RPS4Y1P22090 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.68■□□□□ 0.74
RPS4Y1P22090 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.68■□□□□ 0.74
RPS4Y1P22090 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.68■□□□□ 0.74
RPS4Y1P22090 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RPS4Y1P22090 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.68■□□□□ 0.74
RPS4Y1P22090 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RPS4Y1P22090 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.68■□□□□ 0.74
RPS4Y1P22090 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.68■□□□□ 0.74
RPS4Y1P22090 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.68■□□□□ 0.74
RPS4Y1P22090 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.68■□□□□ 0.74
RPS4Y1P22090 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms