Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.69■■□□□ 1.86
KCNA3P22001 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC26.69■■□□□ 1.86
KCNA3P22001 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.86
KCNA3P22001 USP36-216ENST00000589424 970 ntTSL 5 BASIC26.69■■□□□ 1.86
KCNA3P22001 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.69■■□□□ 1.86
KCNA3P22001 AC138932.3-201ENST00000567634 1902 ntBASIC26.69■■□□□ 1.86
KCNA3P22001 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
KCNA3P22001 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
KCNA3P22001 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
KCNA3P22001 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.68■■□□□ 1.86
KCNA3P22001 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC26.68■■□□□ 1.86
KCNA3P22001 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
KCNA3P22001 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
KCNA3P22001 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC26.67■■□□□ 1.86
KCNA3P22001 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC26.67■■□□□ 1.86
KCNA3P22001 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.67■■□□□ 1.86
KCNA3P22001 AC008550.1-201ENST00000511500 884 ntBASIC26.67■■□□□ 1.86
KCNA3P22001 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC26.67■■□□□ 1.86
KCNA3P22001 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC26.67■■□□□ 1.86
KCNA3P22001 AC069236.1-201ENST00000604339 616 ntBASIC26.67■■□□□ 1.86
KCNA3P22001 AC008694.1-202ENST00000636953 945 ntBASIC26.67■■□□□ 1.86
KCNA3P22001 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
KCNA3P22001 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
KCNA3P22001 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
KCNA3P22001 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC26.66■■□□□ 1.86
KCNA3P22001 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
KCNA3P22001 INO80E-214ENST00000620599 515 ntTSL 2 BASIC26.66■■□□□ 1.86
KCNA3P22001 AC073648.6-201ENST00000641589 218 ntBASIC26.66■■□□□ 1.86
KCNA3P22001 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
KCNA3P22001 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
KCNA3P22001 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.66■■□□□ 1.86
KCNA3P22001 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
KCNA3P22001 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
KCNA3P22001 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
KCNA3P22001 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
KCNA3P22001 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC26.65■■□□□ 1.86
KCNA3P22001 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC26.65■■□□□ 1.86
KCNA3P22001 EEF1DP3-203ENST00000566025 782 ntBASIC26.65■■□□□ 1.86
KCNA3P22001 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC26.65■■□□□ 1.86
KCNA3P22001 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
KCNA3P22001 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC26.65■■□□□ 1.86
KCNA3P22001 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
KCNA3P22001 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
KCNA3P22001 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC26.64■■□□□ 1.86
KCNA3P22001 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC26.64■■□□□ 1.86
KCNA3P22001 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
KCNA3P22001 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
KCNA3P22001 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC26.64■■□□□ 1.86
KCNA3P22001 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
KCNA3P22001 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
KCNA3P22001 AC026366.1-201ENST00000488803 879 ntBASIC26.64■■□□□ 1.86
KCNA3P22001 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC26.64■■□□□ 1.86
KCNA3P22001 UNC93B5-201ENST00000530315 699 ntBASIC26.64■■□□□ 1.86
KCNA3P22001 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC26.64■■□□□ 1.86
KCNA3P22001 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC26.64■■□□□ 1.86
KCNA3P22001 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
KCNA3P22001 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
KCNA3P22001 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.63■■□□□ 1.85
KCNA3P22001 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC26.63■■□□□ 1.85
KCNA3P22001 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
KCNA3P22001 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
KCNA3P22001 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
KCNA3P22001 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
KCNA3P22001 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
KCNA3P22001 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC26.63■■□□□ 1.85
KCNA3P22001 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
KCNA3P22001 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
KCNA3P22001 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
KCNA3P22001 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.63■■□□□ 1.85
KCNA3P22001 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.63■■□□□ 1.85
KCNA3P22001 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
KCNA3P22001 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.62■■□□□ 1.85
KCNA3P22001 PEX7-202ENST00000367756 680 ntTSL 3 BASIC26.62■■□□□ 1.85
KCNA3P22001 RHOD-202ENST00000532559 538 ntTSL 3 BASIC26.62■■□□□ 1.85
KCNA3P22001 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC26.62■■□□□ 1.85
KCNA3P22001 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
KCNA3P22001 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
KCNA3P22001 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
KCNA3P22001 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.62■■□□□ 1.85
KCNA3P22001 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC26.62■■□□□ 1.85
KCNA3P22001 FXN-202ENST00000396364 980 ntTSL 5 BASIC26.61■■□□□ 1.85
KCNA3P22001 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC26.61■■□□□ 1.85
KCNA3P22001 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
KCNA3P22001 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC26.61■■□□□ 1.85
KCNA3P22001 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC26.61■■□□□ 1.85
KCNA3P22001 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
KCNA3P22001 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
KCNA3P22001 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.61■■□□□ 1.85
KCNA3P22001 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
KCNA3P22001 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
KCNA3P22001 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
KCNA3P22001 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
KCNA3P22001 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
KCNA3P22001 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
KCNA3P22001 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC26.6■■□□□ 1.85
KCNA3P22001 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
KCNA3P22001 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
KCNA3P22001 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.6■■□□□ 1.85
KCNA3P22001 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
KCNA3P22001 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms