Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TNFRSF1BP20333 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.93■□□□□ 0.78
TNFRSF1BP20333 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TNFRSF1BP20333 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.93■□□□□ 0.78
TNFRSF1BP20333 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TNFRSF1BP20333 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.93■□□□□ 0.78
TNFRSF1BP20333 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TNFRSF1BP20333 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TNFRSF1BP20333 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TNFRSF1BP20333 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.93■□□□□ 0.78
TNFRSF1BP20333 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TNFRSF1BP20333 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.92■□□□□ 0.78
TNFRSF1BP20333 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TNFRSF1BP20333 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFRSF1BP20333 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFRSF1BP20333 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TNFRSF1BP20333 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.92■□□□□ 0.78
TNFRSF1BP20333 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.92■□□□□ 0.78
TNFRSF1BP20333 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TNFRSF1BP20333 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TNFRSF1BP20333 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
TNFRSF1BP20333 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.91■□□□□ 0.78
TNFRSF1BP20333 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFRSF1BP20333 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
TNFRSF1BP20333 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFRSF1BP20333 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFRSF1BP20333 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.91■□□□□ 0.78
TNFRSF1BP20333 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
TNFRSF1BP20333 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.91■□□□□ 0.78
TNFRSF1BP20333 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.91■□□□□ 0.78
TNFRSF1BP20333 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.91■□□□□ 0.78
TNFRSF1BP20333 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TNFRSF1BP20333 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TNFRSF1BP20333 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TNFRSF1BP20333 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TNFRSF1BP20333 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TNFRSF1BP20333 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFRSF1BP20333 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFRSF1BP20333 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFRSF1BP20333 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TNFRSF1BP20333 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TNFRSF1BP20333 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.9■□□□□ 0.78
TNFRSF1BP20333 OR7E47P-201ENST00000546390 1422 ntBASIC19.9■□□□□ 0.78
TNFRSF1BP20333 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.9■□□□□ 0.78
TNFRSF1BP20333 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TNFRSF1BP20333 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TNFRSF1BP20333 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.9■□□□□ 0.78
TNFRSF1BP20333 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TNFRSF1BP20333 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1BP20333 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1BP20333 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1BP20333 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1BP20333 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TNFRSF1BP20333 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
TNFRSF1BP20333 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.89■□□□□ 0.77
TNFRSF1BP20333 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1BP20333 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1BP20333 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.89■□□□□ 0.77
TNFRSF1BP20333 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1BP20333 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1BP20333 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1BP20333 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1BP20333 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1BP20333 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1BP20333 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TNFRSF1BP20333 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFRSF1BP20333 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TNFRSF1BP20333 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.88■□□□□ 0.77
TNFRSF1BP20333 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFRSF1BP20333 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFRSF1BP20333 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.88■□□□□ 0.77
TNFRSF1BP20333 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFRSF1BP20333 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFRSF1BP20333 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.88■□□□□ 0.77
TNFRSF1BP20333 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.88■□□□□ 0.77
TNFRSF1BP20333 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.88■□□□□ 0.77
TNFRSF1BP20333 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.88■□□□□ 0.77
TNFRSF1BP20333 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.88■□□□□ 0.77
TNFRSF1BP20333 MIR3181-201ENST00000578512 73 ntBASIC19.88■□□□□ 0.77
TNFRSF1BP20333 SLC25A24-204ENST00000569674 2357 ntBASIC19.88■□□□□ 0.77
TNFRSF1BP20333 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TNFRSF1BP20333 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TNFRSF1BP20333 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TNFRSF1BP20333 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TNFRSF1BP20333 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.88■□□□□ 0.77
TNFRSF1BP20333 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TNFRSF1BP20333 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms