Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NELFEP18615 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NELFEP18615 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.1■□□□□ 0.97
NELFEP18615 AC123595.1-201ENST00000440769 1046 ntBASIC21.1■□□□□ 0.97
NELFEP18615 AC034268.1-201ENST00000441047 882 ntBASIC21.1■□□□□ 0.97
NELFEP18615 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.1■□□□□ 0.97
NELFEP18615 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NELFEP18615 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.1■□□□□ 0.97
NELFEP18615 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.1■□□□□ 0.97
NELFEP18615 MIR6084-201ENST00000622012 110 ntBASIC21.1■□□□□ 0.97
NELFEP18615 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NELFEP18615 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NELFEP18615 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NELFEP18615 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NELFEP18615 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NELFEP18615 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.1■□□□□ 0.97
NELFEP18615 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NELFEP18615 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.09■□□□□ 0.97
NELFEP18615 AC092068.2-201ENST00000590491 1708 ntBASIC21.09■□□□□ 0.97
NELFEP18615 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NELFEP18615 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NELFEP18615 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
NELFEP18615 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NELFEP18615 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NELFEP18615 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
NELFEP18615 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NELFEP18615 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
NELFEP18615 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NELFEP18615 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.09■□□□□ 0.97
NELFEP18615 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.09■□□□□ 0.97
NELFEP18615 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NELFEP18615 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NELFEP18615 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
NELFEP18615 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NELFEP18615 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NELFEP18615 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
NELFEP18615 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NELFEP18615 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.08■□□□□ 0.97
NELFEP18615 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.08■□□□□ 0.97
NELFEP18615 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NELFEP18615 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NELFEP18615 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.08■□□□□ 0.96
NELFEP18615 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NELFEP18615 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NELFEP18615 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.08■□□□□ 0.96
NELFEP18615 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NELFEP18615 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NELFEP18615 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
NELFEP18615 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.07■□□□□ 0.96
NELFEP18615 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NELFEP18615 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NELFEP18615 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NELFEP18615 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.07■□□□□ 0.96
NELFEP18615 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NELFEP18615 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NELFEP18615 AL031602.1-201ENST00000633169 911 ntBASIC21.07■□□□□ 0.96
NELFEP18615 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NELFEP18615 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NELFEP18615 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NELFEP18615 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NELFEP18615 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.07■□□□□ 0.96
NELFEP18615 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NELFEP18615 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NELFEP18615 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NELFEP18615 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.06■□□□□ 0.96
NELFEP18615 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NELFEP18615 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
NELFEP18615 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
NELFEP18615 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NELFEP18615 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.06■□□□□ 0.96
NELFEP18615 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NELFEP18615 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NELFEP18615 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.06■□□□□ 0.96
NELFEP18615 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.06■□□□□ 0.96
NELFEP18615 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.06■□□□□ 0.96
NELFEP18615 AC068587.7-201ENST00000641602 218 ntBASIC21.06■□□□□ 0.96
NELFEP18615 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NELFEP18615 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NELFEP18615 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.06■□□□□ 0.96
NELFEP18615 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.05■□□□□ 0.96
NELFEP18615 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NELFEP18615 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.05■□□□□ 0.96
NELFEP18615 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.05■□□□□ 0.96
NELFEP18615 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NELFEP18615 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.05■□□□□ 0.96
NELFEP18615 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.05■□□□□ 0.96
NELFEP18615 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.05■□□□□ 0.96
NELFEP18615 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.05■□□□□ 0.96
NELFEP18615 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.05■□□□□ 0.96
NELFEP18615 AC105233.4-201ENST00000642045 216 ntBASIC21.05■□□□□ 0.96
NELFEP18615 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NELFEP18615 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NELFEP18615 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NELFEP18615 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NELFEP18615 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.05■□□□□ 0.96
NELFEP18615 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.04■□□□□ 0.96
NELFEP18615 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NELFEP18615 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.04■□□□□ 0.96
NELFEP18615 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NELFEP18615 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms